The 2.0 version of rSNPBase

Variant report

Variant rs28676621
Chromosome Location chr1:212217375-212217376
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:71 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212209400-212217800 Weak transcription Small Intestine intestine
2 chr1:212209600-212226600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:212209600-212253000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:212210400-212223600 Weak transcription HSMM muscle
5 chr1:212210400-212227400 Weak transcription Fetal Muscle Trunk muscle
6 chr1:212210400-212228800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:212210400-212228800 Weak transcription Duodenum Mucosa Duodenum
8 chr1:212210400-212228800 Weak transcription Fetal Intestine Large intestine
9 chr1:212210600-212227400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:212210600-212229200 Weak transcription Fetal Brain Female brain
11 chr1:212210800-212217400 Weak transcription Fetal Muscle Leg muscle
12 chr1:212210800-212220800 Weak transcription Fetal Stomach stomach
13 chr1:212210800-212241200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr1:212211000-212218200 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:212211000-212227200 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr1:212211400-212224000 Weak transcription Placenta Amnion Placenta Amnion
17 chr1:212211400-212226600 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:212211400-212229200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr1:212211600-212218200 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:212211600-212218200 Weak transcription Primary neutrophils fromperipheralblood blood
21 chr1:212211600-212227400 Weak transcription Fetal Lung lung
22 chr1:212211800-212218200 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr1:212211800-212223600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:212212000-212219200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr1:212212000-212220600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr1:212212000-212223000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:212212000-212228400 Weak transcription Brain Germinal Matrix brain
28 chr1:212212000-212229200 Weak transcription Fetal Kidney kidney
29 chr1:212213000-212227000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr1:212214200-212222600 Weak transcription Primary hematopoietic stem cells blood
31 chr1:212214400-212219000 Weak transcription NHDF-Ad bronchial
32 chr1:212214400-212227200 Weak transcription NHEK skin
33 chr1:212214400-212228000 Weak transcription NH-A brain
34 chr1:212214400-212228200 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr1:212214400-212278000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr1:212214600-212217800 Weak transcription A549 lung
37 chr1:212214600-212218200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:212214600-212218200 Weak transcription HMEC breast
39 chr1:212214600-212218200 Weak transcription Monocytes-CD14+_RO01746 blood
40 chr1:212214600-212218400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
41 chr1:212214600-212218800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr1:212214600-212218800 Weak transcription GM12878-XiMat blood
43 chr1:212214600-212219000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr1:212214600-212219000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
45 chr1:212214600-212222600 Weak transcription HUVEC blood vessel
46 chr1:212214600-212223400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr1:212214600-212225000 Weak transcription Primary T cells from cord blood blood
48 chr1:212214600-212225400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:212214600-212227400 Weak transcription Thymus Thymus
50 chr1:212214600-212228400 Weak transcription NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015