The 2.0 version of rSNPBase

Variant report

Variant rs28679490
Chromosome Location chr12:122025447-122025448
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:122020200-122027800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
2 chr12:122020600-122027800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
3 chr12:122020600-122028400 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr12:122020600-122030200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr12:122020800-122026800 Weak transcription Primary B cells from cord blood blood
6 chr12:122020800-122027600 Weak transcription Fetal Muscle Trunk muscle
7 chr12:122020800-122027600 Weak transcription Psoas Muscle Psoas
8 chr12:122020800-122027600 Weak transcription Right Atrium heart
9 chr12:122020800-122027800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr12:122020800-122040400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr12:122021000-122027200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
12 chr12:122021000-122027600 Weak transcription Placenta Placenta
13 chr12:122021000-122027800 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr12:122021000-122027800 Weak transcription Fetal Intestine Small intestine
15 chr12:122021000-122027800 Weak transcription Fetal Stomach stomach
16 chr12:122021000-122027800 Weak transcription NHDF-Ad bronchial
17 chr12:122021200-122026000 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr12:122021200-122026200 Weak transcription Primary B cells from peripheral blood blood
19 chr12:122021200-122027200 Weak transcription Fetal Thymus thymus
20 chr12:122021200-122027600 Weak transcription Stomach Smooth Muscle stomach
21 chr12:122021200-122027800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr12:122021200-122027800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
23 chr12:122021200-122027800 Weak transcription Brain Cingulate Gyrus brain
24 chr12:122021200-122027800 Weak transcription Osteobl bone
25 chr12:122021200-122028200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr12:122021200-122028400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr12:122021200-122028400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr12:122021200-122028400 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr12:122021200-122028400 Weak transcription Aorta Aorta
30 chr12:122021200-122036000 Weak transcription Brain Germinal Matrix brain
31 chr12:122021400-122027800 Weak transcription HepG2 liver
32 chr12:122021600-122026200 Weak transcription Primary T cells fromperipheralblood blood
33 chr12:122021600-122033000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr12:122021800-122027400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr12:122022000-122028400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr12:122022200-122026200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr12:122022200-122027400 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr12:122022200-122027600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr12:122022200-122027600 Weak transcription K562 blood
40 chr12:122022200-122027800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr12:122022200-122028200 Weak transcription HUES64 Cell Line embryonic stem cell
42 chr12:122022200-122028200 Weak transcription iPS-20b Cell Line embryonic stem cell
43 chr12:122022200-122028400 Weak transcription H1 Cell Line embryonic stem cell
44 chr12:122022200-122028400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr12:122022200-122028600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr12:122022400-122028400 Weak transcription Fetal Heart heart
47 chr12:122022600-122027400 Weak transcription Dnd41 blood
48 chr12:122024000-122028400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr12:122024200-122026800 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr12:122024200-122027000 Weak transcription Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015