The 2.0 version of rSNPBase

Variant report

Variant rs28687122
Chromosome Location chr12:121990979-121990980
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:121976400-122001200 Strong transcription Dnd41 blood
2 chr12:121976600-122006800 Weak transcription Fetal Lung lung
3 chr12:121976600-122014600 Weak transcription Colonic Mucosa Colon
4 chr12:121976800-121995400 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr12:121976800-121998600 Weak transcription NHDF-Ad bronchial
6 chr12:121977200-122015200 Weak transcription Small Intestine intestine
7 chr12:121978000-121997000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr12:121979400-122006000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr12:121979600-121993000 Strong transcription iPS-18 Cell Line embryonic stem cell
10 chr12:121979600-121993200 Strong transcription iPS-20b Cell Line embryonic stem cell
11 chr12:121981600-122000800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:121986000-122012000 Weak transcription Primary hematopoietic stem cells blood
13 chr12:121986200-121997000 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr12:121986800-122006800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:121986800-122006800 Weak transcription Rectal Smooth Muscle rectum
16 chr12:121986800-122011800 Weak transcription Brain Hippocampus Middle brain
17 chr12:121987000-121998000 Weak transcription Placenta Placenta
18 chr12:121987000-122006800 Weak transcription Right Ventricle heart
19 chr12:121987200-121991400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
20 chr12:121987200-122006800 Weak transcription NHLF lung
21 chr12:121987200-122011800 Weak transcription Fetal Intestine Large intestine
22 chr12:121987400-121991400 Weak transcription Lung lung
23 chr12:121987400-121993600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr12:121987400-121994000 Weak transcription Left Ventricle heart
25 chr12:121987400-121997800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr12:121987400-121998600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr12:121987400-122007000 Weak transcription Ovary ovary
28 chr12:121987400-122011800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr12:121987400-122011800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr12:121987600-121991000 Enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr12:121987600-121991200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr12:121987600-121991200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
33 chr12:121987600-121991200 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr12:121987600-121991400 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr12:121987600-121991400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr12:121987600-121991400 Weak transcription Gastric stomach
37 chr12:121987600-121996800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
38 chr12:121987600-121997200 Weak transcription Fetal Muscle Leg muscle
39 chr12:121987600-121998200 Weak transcription Cortex derived primary cultured neurospheres brain
40 chr12:121987600-121998600 Weak transcription Adipose Nuclei Adipose
41 chr12:121987600-121999400 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr12:121987600-122005200 Weak transcription Brain Inferior Temporal Lobe brain
43 chr12:121987600-122006400 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr12:121987600-122006400 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr12:121987600-122007000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr12:121987600-122007800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr12:121987600-122008400 Weak transcription Brain Cingulate Gyrus brain
48 chr12:121987600-122008600 Weak transcription Brain Germinal Matrix brain
49 chr12:121987600-122010200 Weak transcription Primary T helper cells PMA-I stimulated --
50 chr12:121987600-122012000 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015