Variant report

Variant rs28715887
Chromosome Location chr4:3488426-3488427
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:3467000-3493600 Weak transcription Aorta Aorta
2 chr4:3476800-3490800 Bivalent Enhancer Fetal Muscle Trunk muscle
3 chr4:3481000-3489200 Enhancers Fetal Heart heart
4 chr4:3481200-3488800 Enhancers Left Ventricle heart
5 chr4:3481400-3491200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr4:3483200-3489600 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
7 chr4:3485000-3489400 Bivalent Enhancer Placenta Placenta
8 chr4:3485200-3489400 Bivalent Enhancer HUES6 Cell Line embryonic stem cell
9 chr4:3485200-3489600 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr4:3485400-3488600 Flanking Active TSS Primary B cells from peripheral blood blood
11 chr4:3485400-3489800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr4:3485600-3488600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
13 chr4:3486000-3489000 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
14 chr4:3486200-3488600 Bivalent Enhancer H1 Cell Line embryonic stem cell
15 chr4:3486600-3489200 Enhancers Muscle Satellite Cultured Cells --
16 chr4:3486600-3489400 Enhancers HSMMtube muscle
17 chr4:3486800-3488600 Enhancers A549 lung
18 chr4:3486800-3489600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr4:3486800-3491600 Enhancers HSMM muscle
20 chr4:3487200-3506800 Weak transcription Psoas Muscle Psoas
21 chr4:3487400-3488600 Enhancers Primary B cells from cord blood blood
22 chr4:3487400-3489400 Transcr. at gene 5' and 3' Right Ventricle heart
23 chr4:3487400-3489800 Enhancers Skeletal Muscle Female skeletal muscle
24 chr4:3487400-3497000 Weak transcription Pancreas Pancrea
25 chr4:3487400-3497800 Weak transcription Right Atrium heart
26 chr4:3487600-3488600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr4:3487600-3488600 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr4:3487600-3488800 Enhancers Esophagus oesophagus
29 chr4:3487600-3489200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr4:3487600-3491000 Weak transcription Osteobl bone
31 chr4:3487800-3488600 Enhancers Spleen Spleen
32 chr4:3487800-3488800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr4:3487800-3489400 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
34 chr4:3487800-3489600 Enhancers Brain Inferior Temporal Lobe brain
35 chr4:3487800-3501800 Weak transcription Gastric stomach
36 chr4:3488000-3489000 Weak transcription Breast Myoepithelial Primary Cells Breast
37 chr4:3488000-3489000 Bivalent/Poised TSS Foreskin Fibroblast Primary Cells skin02 Skin
38 chr4:3488000-3489600 Enhancers Brain Cingulate Gyrus brain
39 chr4:3488200-3488800 Enhancers Fetal Muscle Leg muscle
40 chr4:3488200-3489200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr4:3488200-3489400 Enhancers Cortex derived primary cultured neurospheres brain
42 chr4:3488200-3489400 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
43 chr4:3488200-3489800 Enhancers Brain Angular Gyrus brain
44 chr4:3488200-3489800 Enhancers Brain Anterior Caudate brain
45 chr4:3488200-3489800 Enhancers Brain Hippocampus Middle brain
46 chr4:3488200-3489800 Enhancers Brain Substantia Nigra brain
47 chr4:3488200-3490800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
48 chr4:3488200-3491000 Enhancers HMEC breast
49 chr4:3488200-3491200 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr4:3488400-3489400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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