Variant report

Variant	rs28732157
Chromosome Location	chr6:31628216-31628217
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:244)
CpG islands
(count:61)
Chromatin interactive
region (count:20)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr6:31627461-31629304	K562	blood:	n/a	n/a
2	USF2	chr6:31627886-31629136	Hela-S3	cervix:	n/a	n/a
3	PML	chr6:31628213-31628896	MCF-7	breast:	n/a	n/a
4	TAF1	chr6:31628135-31628844	H1-hESC	embryonic stem cell:	n/a	n/a
5	BCLAF1	chr6:31627924-31628888	GM12878	blood:	n/a	chr6:31628508-31628521
6	POLR2A	chr6:31624845-31631075	K562	blood:	n/a	n/a
7	YY1	chr6:31628204-31628879	K562	blood:	n/a	chr6:31628748-31628759
8	MYBL2	chr6:31627816-31629152	HepG2	liver:	n/a	n/a
9	POLR2A	chr6:31627402-31629138	GM12878	blood:	n/a	n/a
10	POU2F2	chr6:31627863-31628736	GM12891	blood:	n/a	n/a
11	POLR2A	chr6:31628186-31628832	ProgFib	skin:	n/a	n/a
12	MAX	chr6:31628167-31628819	SK-N-SH	brain:	n/a	n/a
13	ZNF143	chr6:31627995-31628699	Hela-S3	cervix:	n/a	chr6:31628062-31628081
14	JUND	chr6:31627582-31629079	K562	blood:	n/a	n/a
15	POLR2A	chr6:31627725-31629127	Raji	blood:	n/a	n/a
16	HEY1	chr6:31627241-31629259	K562	blood:	n/a	chr6:31628563-31628578
17	POLR2A	chr6:31628064-31628953	ECC-1	luminal epithelium:	n/a	n/a
18	NR2F2	chr6:31627008-31629425	K562	blood:	n/a	n/a
19	TEAD4	chr6:31627357-31629173	K562	blood:	n/a	n/a
20	TAF1	chr6:31628210-31628926	K562	blood:	n/a	n/a
21	POLR2A	chr6:31627716-31628992	GM19099	blood:	n/a	n/a
22	POLR2A	chr6:31627859-31629233	U87	brain:	n/a	n/a
23	PBX3	chr6:31628211-31628721	A549	lung:	n/a	n/a
24	POLR2A	chr6:31627809-31628937	GM12878	blood:	n/a	n/a
25	MAX	chr6:31627976-31629296	K562	blood:	n/a	n/a
26	E2F4	chr6:31628044-31628811	K562	blood:	n/a	chr6:31628699-31628713 chr6:31628637-31628652 chr6:31628648-31628655
27	CEBPB	chr6:31628082-31629224	K562	blood:	n/a	chr6:31628897-31628908
28	TCF12	chr6:31628194-31628998	A549	lung:	n/a	n/a
29	ELF1	chr6:31627409-31628899	SK-N-SH	brain:	n/a	chr6:31628049-31628062
30	POLR2A	chr6:31627899-31629071	HUVEC	blood vessel:	n/a	n/a
31	HA-E2F1	chr6:31628106-31629057	MCF-7	breast:	n/a	chr6:31628699-31628713 chr6:31628637-31628652 chr6:31628648-31628655 chr6:31628883-31628892
32	MBD4	chr6:31628122-31629259	HepG2	liver:	n/a	n/a
33	IRF1	chr6:31628096-31629186	K562	blood:	n/a	chr6:31628567-31628581
34	TAF1	chr6:31628029-31628939	ECC-1	luminal epithelium:	n/a	n/a
35	CUX1	chr6:31627632-31628992	K562	blood:	n/a	n/a
36	TEAD4	chr6:31625264-31629276	K562	blood:	n/a	n/a
37	POLR2A	chr6:31628052-31628813	GM12892	blood:	n/a	n/a
38	GABPA	chr6:31627408-31628833	K562	blood:	n/a	n/a
39	POLR2A	chr6:31627428-31628826	GM12891	blood:	n/a	n/a
40	POLR2A	chr6:31628192-31628816	H1-hESC	embryonic stem cell:	n/a	n/a
41	TBP	chr6:31627682-31629072	K562	blood:	n/a	n/a
42	POLR2A	chr6:31627704-31629224	K562	blood:	n/a	n/a
43	PML	chr6:31627400-31629252	K562	blood:	n/a	n/a
44	POLR2A	chr6:31628167-31628782	Gliobla	brain:	n/a	n/a
45	POLR2A	chr6:31627954-31628822	GM18526	blood:	n/a	n/a
46	ELF1	chr6:31626778-31629307	K562	blood:	n/a	chr6:31628049-31628062
47	YY1	chr6:31628179-31628952	K562	blood:	n/a	chr6:31628748-31628759
48	POLR2A	chr6:31627364-31629088	HL-60	blood:	n/a	n/a
49	TAF1	chr6:31628034-31628839	PFSK-1	brain:	n/a	n/a
50	POLR2A	chr6:31627664-31629136	HepG2	liver:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:31628196-31628246	AG09309	skin:	n/a
2	chr6:31628196-31628246	HRE	kidney:	n/a
3	chr6:31628196-31628246	Hela-S3	cervix:	n/a
4	chr6:31628196-31628246	SK-N-MC	brain:	n/a
5	chr6:31628196-31628246	HUVEC	blood vessel:	n/a
6	chr6:31628196-31628246	MCF-7	breast:	n/a
7	chr6:31628196-31628246	SKMC	muscle:	n/a
8	chr6:31628196-31628246	SAEC	small airway:	n/a
9	chr6:31628196-31628246	MCF10A-Er-Src	breast:	n/a
10	chr6:31628196-31628246	GM12891	blood:	n/a
11	chr6:31628196-31628246	GM06990	blood:	n/a
12	chr6:31628196-31628246	NT2-D1	testis:	n/a
13	chr6:31628196-31628246	HAEpiC	amniotic membrane:	n/a
14	chr6:31628196-31628246	AG04450	lung:	fetal
15	chr6:31628196-31628246	T-47D	breast:	n/a
16	chr6:31628196-31628246	Jurkat	blood:	n/a
17	chr6:31628196-31628246	HMEC	breast:	n/a
18	chr6:31628196-31628246	AoSMC	blood vessel:	n/a
19	chr6:31628196-31628246	SK-N-SH	brain:	n/a
20	chr6:31628196-31628246	HRCEpiC	kidney:	n/a
21	chr6:31628196-31628246	LNCaP	prostate:	n/a
22	chr6:31628196-31628246	ECC-1	luminal epithelium:	n/a
23	chr6:31628196-31628246	HPAEpiC	pulmonary alveolar:	n/a
24	chr6:31628196-31628246	AG04449	skin:	fetal
25	chr6:31628196-31628246	ovcar-3	ovarian:	n/a
26	chr6:31628196-31628246	Caco-2	colon:	n/a
27	chr6:31628196-31628246	HCPEpiC	choroid plexus:	n/a
28	chr6:31628196-31628246	BE2_C	brain:	n/a
29	chr6:31628196-31628246	HepG2	liver:	n/a
30	chr6:31628196-31628246	K562	blood:	n/a
31	chr6:31628196-31628246	HL-60	blood:	n/a
32	chr6:31628196-31628246	Hepatocyte	liver:	n/a
33	chr6:31628196-31628246	GM12892	blood:	n/a
34	chr6:31628196-31628246	NHBE	bronchial:	n/a
35	chr6:31628196-31628246	AG09319	gingival:	n/a
36	chr6:31628196-31628246	PANC-1	pancreas:	n/a
37	chr6:31628196-31628246	HRPEpiC	eye:	n/a
38	chr6:31628196-31628246	NB4	blood:	n/a
39	chr6:31628196-31628246	HEK293	kidney:	embryo
40	chr6:31628196-31628246	HCM	heart:	n/a
41	chr6:31628196-31628246	BJ	skin:	n/a
42	chr6:31628196-31628246	ProgFib	skin:	n/a
43	chr6:31628196-31628246	NHDF-neo	bronchial:	n/a
44	chr6:31628196-31628246	HNPCEpiC	eye:	n/a
45	chr6:31628196-31628246	HIPEpiC	eye:	n/a
46	chr6:31628196-31628246	HCT-116	colon:	n/a
47	chr6:31628196-31628246	GM19239	blood:	n/a
48	chr6:31628196-31628246	A549	lung:	n/a
49	chr6:31628196-31628246	SK-N-SH_RA	brain:	n/a
50	chr6:31628196-31628246	CMK	blood:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:31627130..31628975-chr6:32096561..32099431,2	K562	blood:
2	chr6:31506029..31511048-chr6:31626239..31630287,7	MCF-7	breast:
3	chr6:31626696..31628687-chr6:31762053..31764771,3	MCF-7	breast:
4	chr6:31617566..31630444-chr6:31823885..31836000,84	K562	blood:
5	chr6:31625699..31629901-chr6:31762894..31764968,3	MCF-7	breast:
6	chr6:31588120..31588945-chr6:31628079..31628681,2	Hela-S3	cervix:
7	chr6:31586074..31595285-chr6:31626460..31635395,11	MCF-7	breast:
8	chr6:31508417..31511292-chr6:31625631..31629953,4	K562	blood:
9	chr6:31602610..31605344-chr6:31627504..31629558,2	MCF-7	breast:
10	chr6:31627970..31635325-chr6:31864036..31871429,12	K562	blood:
11	chr6:31627840..31628355-chr6:31657484..31658146,2	K562	blood:
12	chr1:46598353..46599286-chr6:31628150..31628675,2	NB4	blood:
13	chr19:49199212..49199754-chr6:31628121..31628698,2	HCT-116	colon:
14	chr6:31626044..31628862-chr6:31901843..31903585,2	K562	blood:
15	chr11:65265197..65268056-chr6:31627481..31630298,2	MCF-7	breast:
16	chr12:109123761..109125995-chr6:31627199..31629495,2	MCF-7	breast:
17	chr6:31626203..31628838-chr6:31668692..31672480,4	MCF-7	breast:
18	chr6:31626270..31630199-chr6:31829030..31832230,7	K562	blood:
19	chr6:31509627..31511469-chr6:31626737..31628735,4	MCF-7	breast:
20	chr19:47287460..47289701-chr6:31626637..31629167,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-APOM-3	chr6:31628177-31628498	ENSG00000227198.1

No data

Variant related genes	Relation type
CSNK2B	TF binding region
ENSG00000201207	TF binding region
ENSG00000201207	CpG island
CSNK2B	CpG island
ENSG00000200816	Chromatin interaction
ENSG00000270117	Chromatin interaction
ENSG00000204394	Chromatin interaction
ENSG00000110880	Chromatin interaction
ENSG00000204371	Chromatin interaction
ENSG00000265236	Chromatin interaction
ENSG00000204315	Chromatin interaction
ENSG00000117461	Chromatin interaction
ENSG00000105281	Chromatin interaction
ENSG00000204386	Chromatin interaction
ENSG00000204366	Chromatin interaction
ENSG00000251562	Chromatin interaction
ENSG00000266776	Chromatin interaction
ENSG00000166278	Chromatin interaction
ENSG00000204469	Chromatin interaction
ENSG00000198563	Chromatin interaction
ENSG00000204427	Chromatin interaction
ENSG00000234006	Chromatin interaction
ENSG00000176920	Chromatin interaction
ENSG00000204385	Chromatin interaction

Extended variants
information (count: 37 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs2280801	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2295663	0.86[AFR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28732148	0.81[EUR][1000 genomes]
rs28732150	0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28732154	0.86[AFR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs28732158	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28895016	0.84[EUR][1000 genomes]
rs3131384	0.82[ASN][1000 genomes]
rs3993757	0.93[ASN][1000 genomes]
rs9348876	0.81[EUR][1000 genomes]
rs9378164	0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9378200	0.83[EUR][1000 genomes]
rs9380266	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9391731	0.86[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9404941	0.86[AFR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv601609	chr6:31280101-31799786	Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Enhancers Genic enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	332 gene(s)	inside rSNPs	diseases
2	nsv601610	chr6:31280101-31960770	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	370 gene(s)	inside rSNPs	diseases
3	nsv601628	chr6:31280327-31990098	Weak transcription Transcr. at gene 5' and 3' Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
4	nsv601629	chr6:31280327-31996185	Strong transcription Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	376 gene(s)	inside rSNPs	diseases
5	nsv601630	chr6:31280327-32011317	Genic enhancers Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
6	nsv601631	chr6:31280327-32017540	Genic enhancers Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	378 gene(s)	inside rSNPs	diseases
7	nsv1023939	chr6:31325961-32026747	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Enhancers Weak transcription ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
8	nsv538188	chr6:31325961-32026747	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	372 gene(s)	inside rSNPs	diseases
9	nsv432868	chr6:31338844-31721033	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	250 gene(s)	inside rSNPs	diseases
10	nsv1021747	chr6:31386219-31907266	Flanking Active TSS Active TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Enhancers Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	330 gene(s)	inside rSNPs	diseases
11	nsv830627	chr6:31496214-31659950	Transcr. at gene 5' and 3' Flanking Active TSS Weak transcription Genic enhancers Enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	182 gene(s)	inside rSNPs	diseases
12	nsv884418	chr6:31525448-31741078	Active TSS Genic enhancers Enhancers Flanking Active TSS Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	206 gene(s)	inside rSNPs	diseases
13	nsv1033154	chr6:31550614-32009410	Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Active TSS Enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	326 gene(s)	inside rSNPs	diseases
14	nsv462871	chr6:31575276-31632134	Strong transcription Genic enhancers Active TSS Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	133 gene(s)	inside rSNPs	diseases
15	nsv601942	chr6:31575276-31632134	Flanking Active TSS Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	133 gene(s)	inside rSNPs	diseases
16	nsv884419	chr6:31585000-31632651	Weak transcription Transcr. at gene 5' and 3' Genic enhancers Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	138 gene(s)	inside rSNPs	diseases
17	nsv884420	chr6:31586827-31632651	Genic enhancers Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	138 gene(s)	inside rSNPs	diseases
18	nsv884421	chr6:31588151-31631907	Active TSS Flanking Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	129 gene(s)	inside rSNPs	diseases
19	nsv884422	chr6:31592524-31631907	Genic enhancers Enhancers Active TSS Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	83 gene(s)	inside rSNPs	diseases
20	nsv884424	chr6:31593729-31632651	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	93 gene(s)	inside rSNPs	diseases
21	nsv1017945	chr6:31609641-32481240	Genic enhancers Weak transcription Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	322 gene(s)	inside rSNPs	diseases
22	esv3428142	chr6:31615800-31881809	Flanking Active TSS Active TSS Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	257 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs28732157	C6orf48	cis	lymphoblastoid	seeQTL

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:31626200-31628400	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
2	chr6:31626200-31628400	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
3	chr6:31626400-31628400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr6:31626600-31628400	Transcr. at gene 5' and 3'	Dnd41	blood
5	chr6:31626800-31629000	Flanking Active TSS	Adipose Nuclei	Adipose
6	chr6:31626800-31629000	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr6:31626800-31629200	Active TSS	iPS-15b Cell Line	embryonic stem cell
8	chr6:31626800-31629200	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
9	chr6:31626800-31629200	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
10	chr6:31627000-31628400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
11	chr6:31627000-31629200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr6:31627000-31629200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
13	chr6:31627000-31629200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
14	chr6:31627200-31628400	Flanking Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
15	chr6:31627200-31629000	Active TSS	HUES48 Cell Line	embryonic stem cell
16	chr6:31627200-31629000	Flanking Active TSS	Primary hematopoietic stem cells	blood
17	chr6:31627200-31629000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
18	chr6:31627200-31629000	Flanking Active TSS	HUVEC	blood vessel
19	chr6:31627400-31628400	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
20	chr6:31627400-31628400	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
21	chr6:31627400-31628800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr6:31627400-31628800	Active TSS	Fetal Kidney	kidney
23	chr6:31627400-31628800	Active TSS	Small Intestine	intestine
24	chr6:31627400-31629000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr6:31627400-31629000	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
26	chr6:31627400-31629000	Active TSS	Aorta	Aorta
27	chr6:31627400-31629000	Active TSS	Ovary	ovary
28	chr6:31627400-31629200	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr6:31627400-31629200	Flanking Active TSS	Primary B cells from cord blood	blood
30	chr6:31627400-31629200	Active TSS	A549	lung
31	chr6:31627600-31628400	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
32	chr6:31627600-31628600	Active TSS	ES-WA7 Cell Line	embryonic stem cell
33	chr6:31627600-31628800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
34	chr6:31627600-31628800	Active TSS	Muscle Satellite Cultured Cells	--
35	chr6:31627600-31628800	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
36	chr6:31627600-31628800	Active TSS	Fetal Intestine Large	intestine
37	chr6:31627600-31628800	Active TSS	Gastric	stomach
38	chr6:31627600-31628800	Active TSS	Pancreas	Pancrea
39	chr6:31627600-31628800	Active TSS	Stomach Mucosa	stomach
40	chr6:31627600-31628800	Active TSS	HSMM	muscle
41	chr6:31627600-31628800	Active TSS	HSMMtube	muscle
42	chr6:31627600-31628800	Active TSS	NHDF-Ad	bronchial
43	chr6:31627600-31629000	Active TSS	ES-I3 Cell Line	embryonic stem cell
44	chr6:31627600-31629000	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr6:31627600-31629000	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
46	chr6:31627600-31629000	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
47	chr6:31627600-31629000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
48	chr6:31627600-31629000	Active TSS	Psoas Muscle	Psoas
49	chr6:31627600-31629200	Active TSS	H9 Cell Line	embryonic stem cell
50	chr6:31627600-31629200	Active TSS	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links