Variant report

Variant	rs28772694
Chromosome Location	chr4:171560504-171560505
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs4473624	1.00[EUR][1000 genomes]
rs58895609	1.00[EUR][1000 genomes]
rs59081384	1.00[EUR][1000 genomes]
rs6823145	1.00[EUR][1000 genomes]
rs6824522	1.00[EUR][1000 genomes]
rs72981870	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830151	chr4:171423566-171577867	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:171559400-171560800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr4:171560000-171560600	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
3	chr4:171560400-171560800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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