Variant report

Variant	rs28814605
Chromosome Location	chr14:85835998-85835999
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs10172216	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10174703	0.91[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10177638	0.80[ASN][1000 genomes]
rs10179232	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11125941	0.82[ASN][1000 genomes]
rs11893614	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13397831	0.86[EUR][1000 genomes]
rs13403509	0.86[AMR][1000 genomes];0.85[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs13423306	0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1386399	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1527959	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1534418	0.81[ASN][1000 genomes]
rs1534419	0.81[ASN][1000 genomes]
rs1534420	0.81[ASN][1000 genomes]
rs1830260	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1843779	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1872789	0.82[ASN][1000 genomes]
rs2129509	0.86[ASN][1000 genomes]
rs2204655	0.81[ASN][1000 genomes]
rs2204656	0.82[ASN][1000 genomes]
rs2901516	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2901517	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs4479415	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545965	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6545966	0.84[ASN][1000 genomes]
rs6545967	0.82[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6545968	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6705835	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6706506	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6713090	0.93[AMR][1000 genomes];0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6734002	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6741300	0.87[AMR][1000 genomes];0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs6749020	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6752010	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7349258	0.81[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7421841	0.82[ASN][1000 genomes]
rs9678363	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs9679110	0.83[AMR][1000 genomes]
rs9679111	0.81[AMR][1000 genomes]
rs974344	0.82[ASN][1000 genomes]
rs974345	0.82[ASN][1000 genomes]
rs9751138	0.89[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1047924	chr14:85826280-85868228	Enhancers Weak transcription Active TSS Flanking Active TSS	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85832400-85840200	Weak transcription	Ovary	ovary

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