The 2.0 version of rSNPBase

Variant report

Variant rs28817601
Chromosome Location chr7:111963130-111963131
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:111913200-111965200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr7:111923600-111964600 Weak transcription Esophagus oesophagus
3 chr7:111923600-111964800 Weak transcription Gastric stomach
4 chr7:111926200-111979600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr7:111926600-111982200 Weak transcription Right Ventricle heart
6 chr7:111926800-111964800 Weak transcription Lung lung
7 chr7:111927200-111965000 Weak transcription Brain Anterior Caudate brain
8 chr7:111927400-111964800 Weak transcription Fetal Stomach stomach
9 chr7:111928600-111978000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr7:111930800-111965200 Weak transcription Muscle Satellite Cultured Cells --
11 chr7:111931000-111981000 Weak transcription HSMMtube muscle
12 chr7:111934000-111965200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr7:111938000-111965000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr7:111939200-111964600 Weak transcription Left Ventricle heart
15 chr7:111940000-111964800 Weak transcription iPS-15b Cell Line embryonic stem cell
16 chr7:111941000-111963200 Weak transcription Fetal Brain Male brain
17 chr7:111943000-111978600 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr7:111943000-111985200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr7:111945200-111965000 Weak transcription Pancreas Pancrea
20 chr7:111945200-111986800 Weak transcription Hela-S3 cervix
21 chr7:111947400-111981000 Weak transcription Brain Angular Gyrus brain
22 chr7:111950200-111965000 Weak transcription GM12878-XiMat blood
23 chr7:111950200-111967400 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr7:111950400-111965200 Weak transcription Fetal Intestine Small intestine
25 chr7:111952600-111965200 Weak transcription Fetal Muscle Trunk muscle
26 chr7:111954600-111964600 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr7:111954800-111964800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr7:111956200-111965000 Weak transcription Brain Substantia Nigra brain
29 chr7:111956200-111977200 Weak transcription H9 Cell Line embryonic stem cell
30 chr7:111956200-111982400 Weak transcription Brain Cingulate Gyrus brain
31 chr7:111956200-111983200 Weak transcription Brain Hippocampus Middle brain
32 chr7:111957000-111965000 Weak transcription Colonic Mucosa Colon
33 chr7:111957400-111980200 Weak transcription NHDF-Ad bronchial
34 chr7:111957600-111965000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr7:111957600-111967600 Strong transcription Primary T cells fromperipheralblood blood
36 chr7:111957800-111980200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr7:111958200-111963200 Weak transcription Rectal Smooth Muscle rectum
38 chr7:111958200-111963600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr7:111958200-111963600 Strong transcription Primary B cells from peripheral blood blood
40 chr7:111958400-111966200 Strong transcription Primary monocytes fromperipheralblood blood
41 chr7:111958600-111966000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr7:111958600-111968600 Strong transcription Dnd41 blood
43 chr7:111958800-111963800 Strong transcription Primary T regulatory cells fromperipheralblood blood
44 chr7:111958800-111968000 Strong transcription Primary hematopoietic stem cells blood
45 chr7:111958800-111987400 Weak transcription Colon Smooth Muscle Colon
46 chr7:111959000-111972400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr7:111959000-111982400 Weak transcription HUVEC blood vessel
48 chr7:111959200-111969400 Weak transcription Stomach Mucosa stomach
49 chr7:111959400-111967000 Weak transcription Brain Inferior Temporal Lobe brain
50 chr7:111959600-111964600 Weak transcription Primary mononuclear cells fromperipheralblood Blood

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Last update: Aug 31, 2015