The 2.0 version of rSNPBase

Variant report

Variant rs28841410
Chromosome Location chr3:179345768-179345769
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:179323400-179362200 Weak transcription H9 Cell Line embryonic stem cell
2 chr3:179323800-179351200 Weak transcription Fetal Brain Male brain
3 chr3:179324000-179352200 Weak transcription Esophagus oesophagus
4 chr3:179335200-179346400 Weak transcription Gastric stomach
5 chr3:179340200-179346200 Weak transcription Pancreas Pancrea
6 chr3:179340200-179346800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr3:179340200-179351000 Weak transcription Aorta Aorta
8 chr3:179340400-179350800 Weak transcription Brain Substantia Nigra brain
9 chr3:179341200-179351800 Weak transcription Right Ventricle heart
10 chr3:179341800-179345800 Weak transcription Brain Inferior Temporal Lobe brain
11 chr3:179342400-179346800 Weak transcription Muscle Satellite Cultured Cells --
12 chr3:179342800-179362200 Weak transcription iPS-15b Cell Line embryonic stem cell
13 chr3:179343000-179347000 Weak transcription Spleen Spleen
14 chr3:179343000-179347200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr3:179343000-179351000 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr3:179343000-179351200 Weak transcription H1 Cell Line embryonic stem cell
17 chr3:179343200-179347000 Weak transcription Fetal Muscle Trunk muscle
18 chr3:179343200-179348800 Weak transcription GM12878-XiMat blood
19 chr3:179343200-179351600 Weak transcription Left Ventricle heart
20 chr3:179343200-179352600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr3:179343800-179346400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr3:179344000-179345800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
23 chr3:179344000-179345800 Weak transcription Primary B cells from cord blood blood
24 chr3:179344000-179345800 Weak transcription Primary hematopoietic stem cells short term culture blood
25 chr3:179344000-179345800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr3:179344000-179346600 Weak transcription Primary T cells from cord blood blood
27 chr3:179344000-179347200 Weak transcription Adipose Nuclei Adipose
28 chr3:179344000-179347800 Weak transcription Primary T helper naive cells fromperipheralblood blood
29 chr3:179344000-179347800 Weak transcription Brain Hippocampus Middle brain
30 chr3:179344000-179358400 Weak transcription Liver Liver
31 chr3:179344200-179345800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr3:179344200-179346000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr3:179344200-179346000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr3:179344200-179348800 Weak transcription Psoas Muscle Psoas
35 chr3:179344200-179365600 Weak transcription Stomach Smooth Muscle stomach
36 chr3:179344400-179346000 Weak transcription Primary hematopoietic stem cells blood
37 chr3:179344400-179346600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr3:179344400-179351600 Weak transcription Fetal Muscle Leg muscle
39 chr3:179344600-179345800 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr3:179344600-179346400 Weak transcription Fetal Intestine Small intestine
41 chr3:179344800-179346600 Weak transcription Fetal Stomach stomach
42 chr3:179345600-179347600 Weak transcription Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015