Variant report

Variant	rs28844341
Chromosome Location	chr16:46386082-46386083
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3351345	chr16:46385802-46460549	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
2	esv3415772	chr16:46385802-46461249	ZNF genes & repeats Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
3	esv3348821	chr16:46385802-46461449	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Active TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
4	esv3362417	chr16:46385802-46461449	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
5	esv3418529	chr16:46385802-46461449	Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
6	esv3433355	chr16:46385802-46461449	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
7	nsv482466	chr16:46385802-46508907	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
8	esv3451889	chr16:46385878-46386305	ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS	n/a	n/a	inside rSNPs	n/a
9	nsv572449	chr16:46385922-46443964	ZNF genes & repeats Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
10	nsv572450	chr16:46385922-46450037	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
11	nsv572451	chr16:46385922-46452565	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Bivalent/Poised TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
12	nsv572452	chr16:46385922-46498901	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
13	nsv572453	chr16:46385922-46499613	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
14	nsv572454	chr16:46385922-46499821	Weak transcription ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
15	nsv572455	chr16:46385922-46500009	Weak transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
16	nsv572456	chr16:46385922-46500195	ZNF genes & repeats Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Enhancers	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
17	nsv572457	chr16:46385922-46500302	ZNF genes & repeats Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a
18	nsv572458	chr16:46385922-46500451	ZNF genes & repeats Weak transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	n/a

No data

Chromatin state (count:119 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:46385800-46386800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr16:46385800-46386800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr16:46385800-46386800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr16:46385800-46386800	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr16:46385800-46386800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 2	blood
6	chr16:46385800-46386800	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
7	chr16:46385800-46386800	ZNF genes & repeats	Primary T helper naive cells fromperipheralblood	blood
8	chr16:46385800-46386800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
9	chr16:46385800-46386800	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
10	chr16:46385800-46386800	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
11	chr16:46385800-46386800	ZNF genes & repeats	Primary T killer naive cells fromperipheralblood	blood
12	chr16:46385800-46386800	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
13	chr16:46385800-46386800	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
14	chr16:46385800-46386800	ZNF genes & repeats	Adipose Nuclei	Adipose
15	chr16:46385800-46386800	ZNF genes & repeats	Brain Angular Gyrus	brain
16	chr16:46385800-46386800	ZNF genes & repeats	Brain Anterior Caudate	brain
17	chr16:46385800-46386800	ZNF genes & repeats	Brain Cingulate Gyrus	brain
18	chr16:46385800-46386800	ZNF genes & repeats	Brain Hippocampus Middle	brain
19	chr16:46385800-46386800	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
20	chr16:46385800-46386800	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
21	chr16:46385800-46386800	ZNF genes & repeats	Brain Substantia Nigra	brain
22	chr16:46385800-46386800	ZNF genes & repeats	Duodenum Mucosa	Duodenum
23	chr16:46385800-46386800	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
24	chr16:46385800-46386800	ZNF genes & repeats	Fetal Heart	heart
25	chr16:46385800-46386800	ZNF genes & repeats	Fetal Kidney	kidney
26	chr16:46385800-46386800	ZNF genes & repeats	Fetal Lung	lung
27	chr16:46385800-46386800	ZNF genes & repeats	Ovary	ovary
28	chr16:46385800-46386800	ZNF genes & repeats	Rectal Mucosa Donor 29	rectum
29	chr16:46385800-46386800	ZNF genes & repeats	Rectal Mucosa Donor 31	rectum
30	chr16:46385800-46386800	ZNF genes & repeats	Rectal Smooth Muscle	rectum
31	chr16:46385800-46386800	ZNF genes & repeats	Skeletal Muscle Male	skeletal muscle
32	chr16:46385800-46386800	ZNF genes & repeats	Skeletal Muscle Female	skeletal muscle
33	chr16:46385800-46386800	ZNF genes & repeats	Stomach Mucosa	stomach
34	chr16:46385800-46386800	ZNF genes & repeats	Thymus	Thymus
35	chr16:46385800-46386800	ZNF genes & repeats	A549	lung
36	chr16:46385800-46386800	ZNF genes & repeats	Dnd41	blood
37	chr16:46385800-46386800	ZNF genes & repeats	GM12878-XiMat	blood
38	chr16:46385800-46386800	Flanking Bivalent TSS/Enh	Hela-S3	cervix
39	chr16:46385800-46386800	ZNF genes & repeats	HSMMtube	muscle
40	chr16:46385800-46386800	ZNF genes & repeats	HUVEC	blood vessel
41	chr16:46385800-46386800	ZNF genes & repeats	NH-A	brain
42	chr16:46385800-46386800	ZNF genes & repeats	NHDF-Ad	bronchial
43	chr16:46385800-46386800	ZNF genes & repeats	NHEK	skin
44	chr16:46385800-46386800	ZNF genes & repeats	NHLF	lung
45	chr16:46385800-46386800	ZNF genes & repeats	Osteobl	bone
46	chr16:46385800-46387000	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
47	chr16:46385800-46388400	ZNF genes & repeats	Primary T cells from cord blood	blood
48	chr16:46385800-46393400	ZNF genes & repeats	Aorta	Aorta
49	chr16:46385800-46397000	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
50	chr16:46385800-46397000	ZNF genes & repeats	H1 Cell Line	embryonic stem cell

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