The 2.0 version of rSNPBase

Variant report

Variant rs2884671
Chromosome Location chr12:4726832-4726833
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:4716400-4727200 Weak transcription HepG2 liver
2 chr12:4721200-4727200 Weak transcription Psoas Muscle Psoas
3 chr12:4723600-4727000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr12:4723600-4727200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
5 chr12:4723600-4728200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr12:4723600-4735600 Weak transcription HMEC breast
7 chr12:4723800-4727000 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr12:4723800-4727400 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr12:4723800-4728000 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr12:4723800-4728600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr12:4723800-4732000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr12:4724000-4727000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
13 chr12:4724000-4727000 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr12:4724000-4727200 Weak transcription Brain Germinal Matrix brain
15 chr12:4724200-4727400 Weak transcription Fetal Thymus thymus
16 chr12:4724200-4735600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr12:4724200-4756800 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr12:4724400-4727200 Weak transcription Osteobl bone
19 chr12:4724400-4727600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr12:4724800-4727200 Weak transcription Ovary ovary
21 chr12:4724800-4727400 Weak transcription HSMMtube muscle
22 chr12:4724800-4729000 Weak transcription Primary hematopoietic stem cells blood
23 chr12:4725000-4727200 Weak transcription Fetal Brain Female brain
24 chr12:4725000-4727600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr12:4725200-4727000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr12:4725200-4727200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr12:4725200-4727200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr12:4725200-4727200 Weak transcription Spleen Spleen
29 chr12:4725200-4727400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:4725200-4727600 Weak transcription Primary monocytes fromperipheralblood blood
31 chr12:4725200-4727600 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr12:4725200-4727600 Weak transcription Fetal Intestine Large intestine
33 chr12:4725200-4727600 Weak transcription Dnd41 blood
34 chr12:4725200-4728200 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr12:4725200-4728400 Weak transcription Esophagus oesophagus
36 chr12:4725200-4728400 Weak transcription A549 lung
37 chr12:4725200-4728800 Weak transcription Gastric stomach
38 chr12:4725400-4727000 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr12:4725400-4727000 Weak transcription Duodenum Mucosa Duodenum
40 chr12:4725400-4727000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr12:4725400-4727200 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr12:4725400-4727200 Weak transcription Stomach Smooth Muscle stomach
43 chr12:4725400-4727200 Weak transcription GM12878-XiMat blood
44 chr12:4725400-4727400 Weak transcription Primary T cells fromperipheralblood blood
45 chr12:4725400-4727600 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr12:4725400-4727800 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr12:4725400-4728000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr12:4725400-4728200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr12:4725400-4728600 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr12:4725400-4728800 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015