Variant report

Variant	rs2884833
Chromosome Location	chr4:151192683-151192684
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026797	chr4:150246932-151217137	Bivalent Enhancer Enhancers Strong transcription Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	nsv932022	chr4:150831733-151419552	Enhancers Weak transcription Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
3	nsv1032689	chr4:150971003-151316856	Flanking Active TSS Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv537300	chr4:150971003-151316856	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv880256	chr4:151126725-151751369	Enhancers Strong transcription Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
6	nsv880257	chr4:151170387-151231371	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	esv3368597	chr4:151192491-151192868	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:151166400-151199000	Weak transcription	Gastric	stomach
2	chr4:151170000-151199000	Weak transcription	Skeletal Muscle Male	skeletal muscle
3	chr4:151172800-151201600	Weak transcription	GM12878-XiMat	blood
4	chr4:151173400-151201400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr4:151176400-151202800	Weak transcription	Psoas Muscle	Psoas
6	chr4:151178000-151193200	Weak transcription	Fetal Lung	lung
7	chr4:151178200-151192800	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr4:151178200-151193000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr4:151178200-151204200	Weak transcription	Colonic Mucosa	Colon
10	chr4:151178400-151192800	Weak transcription	Lung	lung
11	chr4:151178400-151201400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
12	chr4:151178400-151201600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr4:151178400-151208600	Weak transcription	H9 Cell Line	embryonic stem cell
14	chr4:151180000-151198800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr4:151180200-151197800	Weak transcription	Duodenum Mucosa	Duodenum
16	chr4:151180400-151201200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr4:151181200-151195400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr4:151181400-151193000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
19	chr4:151181400-151198800	Weak transcription	Spleen	Spleen
20	chr4:151181400-151201800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr4:151181600-151198600	Weak transcription	H1 Cell Line	embryonic stem cell
22	chr4:151181600-151202000	Weak transcription	Brain Inferior Temporal Lobe	brain
23	chr4:151181600-151202000	Weak transcription	Fetal Kidney	kidney
24	chr4:151181600-151203400	Weak transcription	Right Ventricle	heart
25	chr4:151181800-151201600	Weak transcription	Brain Angular Gyrus	brain
26	chr4:151181800-151209000	Weak transcription	Brain Cingulate Gyrus	brain
27	chr4:151182000-151198800	Weak transcription	Esophagus	oesophagus
28	chr4:151182000-151201200	Weak transcription	Fetal Heart	heart
29	chr4:151182600-151208000	Weak transcription	Skeletal Muscle Female	skeletal muscle
30	chr4:151182800-151193000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr4:151184600-151199000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
32	chr4:151184800-151209200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
33	chr4:151185000-151202000	Weak transcription	K562	blood
34	chr4:151186200-151198200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr4:151186200-151200800	Weak transcription	NHLF	lung
36	chr4:151186200-151208000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
37	chr4:151186400-151204800	Weak transcription	Placenta	Placenta
38	chr4:151187200-151199000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
39	chr4:151187400-151198800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
40	chr4:151187600-151192800	Weak transcription	Brain Anterior Caudate	brain
41	chr4:151187600-151192800	Weak transcription	Fetal Muscle Trunk	muscle
42	chr4:151187600-151193200	Weak transcription	Adipose Nuclei	Adipose
43	chr4:151187600-151193200	Weak transcription	Ovary	ovary
44	chr4:151187600-151198800	Weak transcription	Thymus	Thymus
45	chr4:151187600-151199000	Weak transcription	Rectal Smooth Muscle	rectum
46	chr4:151187600-151200400	Weak transcription	HSMM	muscle
47	chr4:151187600-151202000	Weak transcription	Left Ventricle	heart
48	chr4:151187600-151206000	Weak transcription	Dnd41	blood
49	chr4:151187800-151193000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
50	chr4:151187800-151198600	Weak transcription	Fetal Thymus	thymus

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