Variant report

Variant rs28855463
Chromosome Location chr21:48075239-48075240
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:48056200-48081400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr21:48059800-48079200 Strong transcription Osteobl bone
3 chr21:48060200-48085800 Strong transcription Placenta Placenta
4 chr21:48060800-48075600 Strong transcription Fetal Intestine Large intestine
5 chr21:48060800-48077200 Strong transcription Fetal Thymus thymus
6 chr21:48060800-48077200 Strong transcription Stomach Smooth Muscle stomach
7 chr21:48061000-48075600 Strong transcription Rectal Smooth Muscle rectum
8 chr21:48061000-48079200 Strong transcription Duodenum Mucosa Duodenum
9 chr21:48061000-48079400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr21:48061000-48079400 Strong transcription Brain Anterior Caudate brain
11 chr21:48061000-48079400 Strong transcription Placenta Amnion Placenta Amnion
12 chr21:48061800-48077600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr21:48062000-48079000 Strong transcription HSMMtube muscle
14 chr21:48062000-48079200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr21:48062200-48079200 Strong transcription Muscle Satellite Cultured Cells --
16 chr21:48063000-48075600 Strong transcription Colonic Mucosa Colon
17 chr21:48063000-48080800 Strong transcription Ovary ovary
18 chr21:48063200-48076600 Strong transcription Rectal Mucosa Donor 29 rectum
19 chr21:48063400-48079400 Strong transcription NH-A brain
20 chr21:48063400-48079600 Strong transcription Skeletal Muscle Female skeletal muscle
21 chr21:48063400-48080800 Strong transcription Rectal Mucosa Donor 31 rectum
22 chr21:48063600-48075400 Strong transcription Colon Smooth Muscle Colon
23 chr21:48063800-48081400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr21:48066000-48079400 Strong transcription HSMM muscle
25 chr21:48068000-48075400 Strong transcription Primary T killer memory cells from peripheral blood blood
26 chr21:48068000-48075800 Strong transcription H1 Cell Line embryonic stem cell
27 chr21:48068200-48075400 Strong transcription iPS-15b Cell Line embryonic stem cell
28 chr21:48068200-48077400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
29 chr21:48069600-48081400 Weak transcription Psoas Muscle Psoas
30 chr21:48070400-48075400 Strong transcription Brain Substantia Nigra brain
31 chr21:48070600-48075400 Strong transcription Primary T helper naive cells from peripheral blood blood
32 chr21:48070600-48079000 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
33 chr21:48070600-48086800 Weak transcription Fetal Heart heart
34 chr21:48070800-48076200 Strong transcription Brain Cingulate Gyrus brain
35 chr21:48071000-48075600 Strong transcription Brain Angular Gyrus brain
36 chr21:48071000-48079200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr21:48071000-48080800 Strong transcription Brain Hippocampus Middle brain
38 chr21:48071000-48081600 Weak transcription Right Atrium heart
39 chr21:48071200-48079600 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr21:48071800-48079400 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr21:48072000-48080400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr21:48072000-48081400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
43 chr21:48072000-48081400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr21:48072200-48077400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr21:48072400-48076000 ZNF genes & repeats GM12878-XiMat blood
46 chr21:48072800-48076000 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
47 chr21:48072800-48076200 ZNF genes & repeats Primary hematopoietic stem cells blood
48 chr21:48072800-48077200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr21:48072800-48077200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr21:48073000-48076000 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell

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