Variant report

Variant	rs2887876
Chromosome Location	chr14:79270576-79270577
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11159381	0.82[YRI][hapmap]
rs17108255	1.00[EUR][1000 genomes]
rs2098795	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2113572	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2370873	0.82[YRI][hapmap]
rs2370874	0.92[YRI][hapmap]
rs3919591	1.00[EUR][1000 genomes]
rs4903803	0.84[YRI][hapmap]
rs7160139	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7161074	1.00[EUR][1000 genomes]
rs73317963	1.00[EUR][1000 genomes]
rs74066336	1.00[EUR][1000 genomes]
rs8003954	1.00[EUR][1000 genomes]
rs918888	0.91[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752511	chr14:79233907-79270576	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
2	esv2753664	chr14:79233907-79270576	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a
3	nsv431018	chr14:79233907-79270576	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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