The 2.0 version of rSNPBase

Variant report

Variant rs28952018
Chromosome Location chr7:127020776-127020777
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:126988400-127030200 Weak transcription Fetal Intestine Small intestine
2 chr7:126988400-127031400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr7:126988400-127031400 Weak transcription Colonic Mucosa Colon
4 chr7:126988400-127031400 Weak transcription Pancreas Pancrea
5 chr7:126989000-127031000 Weak transcription Fetal Brain Male brain
6 chr7:126991600-127030400 Strong transcription Monocytes-CD14+_RO01746 blood
7 chr7:126995400-127022600 Strong transcription Dnd41 blood
8 chr7:126995600-127027600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr7:126997400-127031200 Weak transcription Brain Substantia Nigra brain
10 chr7:126999200-127027200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr7:126999400-127031400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr7:126999600-127023200 Weak transcription Small Intestine intestine
13 chr7:127001600-127023200 Weak transcription Stomach Smooth Muscle stomach
14 chr7:127001600-127027400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr7:127001600-127029000 Weak transcription Aorta Aorta
16 chr7:127001600-127031200 Weak transcription Fetal Stomach stomach
17 chr7:127001600-127031400 Weak transcription Brain Angular Gyrus brain
18 chr7:127001600-127031400 Weak transcription Esophagus oesophagus
19 chr7:127001600-127031400 Weak transcription Gastric stomach
20 chr7:127001600-127031400 Weak transcription Placenta Amnion Placenta Amnion
21 chr7:127001600-127031400 Weak transcription Right Ventricle heart
22 chr7:127003800-127030200 Weak transcription Fetal Heart heart
23 chr7:127010200-127031400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr7:127011800-127023200 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr7:127012600-127030800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr7:127013800-127031200 Weak transcription Fetal Brain Female brain
27 chr7:127014200-127030400 Weak transcription Rectal Smooth Muscle rectum
28 chr7:127014400-127031000 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr7:127014600-127022600 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr7:127014600-127027200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr7:127014800-127023400 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr7:127014800-127027400 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr7:127015000-127022600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr7:127015000-127022600 Weak transcription Fetal Muscle Leg muscle
35 chr7:127015000-127023200 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr7:127015000-127023200 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr7:127015000-127023400 Weak transcription NHDF-Ad bronchial
38 chr7:127015000-127025200 Weak transcription NHLF lung
39 chr7:127015000-127026600 Weak transcription Fetal Adrenal Gland Adrenal Gland
40 chr7:127015000-127027400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr7:127015000-127027400 Weak transcription Colon Smooth Muscle Colon
42 chr7:127015000-127027600 Weak transcription Left Ventricle heart
43 chr7:127015000-127027600 Weak transcription Ovary ovary
44 chr7:127015000-127028800 Weak transcription Psoas Muscle Psoas
45 chr7:127015000-127030400 Weak transcription Brain Cingulate Gyrus brain
46 chr7:127015000-127031000 Weak transcription Brain Anterior Caudate brain
47 chr7:127015000-127031200 Weak transcription Brain Hippocampus Middle brain
48 chr7:127015000-127031200 Weak transcription Thymus Thymus
49 chr7:127015000-127031200 Weak transcription HSMMtube muscle
50 chr7:127015000-127031400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015