The 2.0 version of rSNPBase

Variant report

Variant rs290217
Chromosome Location chr9:93593823-93593824
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:93565000-93609000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr9:93567800-93597400 Weak transcription Gastric stomach
3 chr9:93577000-93598800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr9:93577800-93606200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr9:93580800-93603400 Weak transcription K562 blood
6 chr9:93582600-93595200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr9:93583000-93599600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr9:93585400-93594600 Weak transcription Fetal Intestine Large intestine
9 chr9:93585400-93594800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr9:93585600-93607800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr9:93589200-93606000 Weak transcription Colonic Mucosa Colon
12 chr9:93590000-93601600 Weak transcription Rectal Mucosa Donor 31 rectum
13 chr9:93591000-93599600 Weak transcription Rectal Mucosa Donor 29 rectum
14 chr9:93591000-93603200 Weak transcription Fetal Kidney kidney
15 chr9:93591200-93595000 Weak transcription Adipose Nuclei Adipose
16 chr9:93591200-93596400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr9:93591400-93595000 Weak transcription Small Intestine intestine
18 chr9:93591800-93596400 Strong transcription Monocytes-CD14+_RO01746 blood
19 chr9:93592600-93594000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr9:93592600-93602200 Weak transcription Esophagus oesophagus
21 chr9:93592800-93595000 Weak transcription Fetal Stomach stomach
22 chr9:93593000-93594000 Enhancers Fetal Thymus thymus
23 chr9:93593200-93594000 Enhancers Duodenum Smooth Muscle Duodenum
24 chr9:93593200-93594200 Enhancers Primary hematopoietic stem cells blood
25 chr9:93593200-93594200 Flanking Active TSS GM12878-XiMat blood
26 chr9:93593200-93596000 Enhancers Fetal Intestine Small intestine
27 chr9:93593400-93594000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr9:93593400-93595800 Enhancers Stomach Mucosa stomach
29 chr9:93593600-93594200 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
30 chr9:93593600-93594200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr9:93593600-93594400 Weak transcription Primary monocytes fromperipheralblood blood
32 chr9:93593600-93595200 Weak transcription Thymus Thymus
33 chr9:93593600-93595400 Weak transcription Spleen Spleen
34 chr9:93593600-93596800 Strong transcription Primary hematopoietic stem cells short term culture blood
35 chr9:93593600-93597200 Weak transcription Pancreas Pancrea
36 chr9:93593600-93603400 Genic enhancers Primary B cells from peripheral blood blood
37 chr9:93593800-93594400 Flanking Active TSS Duodenum Mucosa Duodenum
38 chr9:93593800-93595000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015