The 2.0 version of rSNPBase

Variant report

Variant rs2902277
Chromosome Location chr1:179292442-179292443
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179263800-179304600 Weak transcription Lung lung
2 chr1:179263800-179306400 Weak transcription Gastric stomach
3 chr1:179264600-179304600 Weak transcription Right Ventricle heart
4 chr1:179264600-179310200 Weak transcription Brain Substantia Nigra brain
5 chr1:179264600-179314000 Weak transcription Brain Angular Gyrus brain
6 chr1:179264600-179314000 Weak transcription Brain Inferior Temporal Lobe brain
7 chr1:179264800-179313800 Weak transcription Brain Hippocampus Middle brain
8 chr1:179264800-179313800 Weak transcription Fetal Brain Female brain
9 chr1:179264800-179334200 Weak transcription Colon Smooth Muscle Colon
10 chr1:179266400-179322800 Weak transcription Small Intestine intestine
11 chr1:179268400-179312000 Weak transcription Fetal Thymus thymus
12 chr1:179272600-179313800 Weak transcription Brain Anterior Caudate brain
13 chr1:179273000-179311600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:179273200-179294600 Weak transcription Placenta Placenta
15 chr1:179273800-179293400 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr1:179274600-179302400 Weak transcription Left Ventricle heart
17 chr1:179274600-179304400 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr1:179274600-179306000 Weak transcription Stomach Smooth Muscle stomach
19 chr1:179275600-179311600 Weak transcription HUVEC blood vessel
20 chr1:179276400-179306200 Weak transcription Fetal Muscle Trunk muscle
21 chr1:179276600-179304800 Weak transcription Pancreas Pancrea
22 chr1:179276800-179295200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr1:179277600-179296400 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:179280400-179296200 Weak transcription NH-A brain
25 chr1:179280400-179314000 Weak transcription NHLF lung
26 chr1:179280600-179292800 Weak transcription NHDF-Ad bronchial
27 chr1:179280600-179293400 Weak transcription Osteobl bone
28 chr1:179280600-179299000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr1:179281200-179300200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr1:179282000-179313000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:179282200-179295200 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr1:179282400-179292800 Weak transcription Primary B cells from peripheral blood blood
33 chr1:179282400-179304200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr1:179282400-179313800 Weak transcription HSMMtube muscle
35 chr1:179282600-179293400 Weak transcription Duodenum Mucosa Duodenum
36 chr1:179283000-179293400 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:179283200-179298800 Weak transcription HepG2 liver
38 chr1:179283200-179308600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:179283400-179292600 Weak transcription Primary T helper naive cells fromperipheralblood blood
40 chr1:179283800-179292600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
41 chr1:179286400-179313800 Weak transcription Psoas Muscle Psoas
42 chr1:179287200-179294800 Weak transcription Primary T regulatory cells fromperipheralblood blood
43 chr1:179287200-179297200 Weak transcription Spleen Spleen
44 chr1:179287400-179304400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr1:179287600-179299000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr1:179288400-179293400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr1:179289000-179299200 Weak transcription Fetal Stomach stomach
48 chr1:179290000-179297800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr1:179290200-179297800 Strong transcription Primary T cells fromperipheralblood blood
50 chr1:179290200-179297800 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015