Variant report
| Variant | rs290430 |
|---|---|
| Chromosome Location | chr20:52675648-52675649 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:52641600-52676400 | Weak transcription | Stomach Mucosa | stomach |
| 2 | chr20:52645200-52682200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr20:52669400-52681800 | Weak transcription | Gastric | stomach |
| 4 | chr20:52674400-52681200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 5 | chr20:52674400-52682000 | Weak transcription | Colonic Mucosa | Colon |
| 6 | chr20:52674800-52675800 | Enhancers | Primary B cells from peripheral blood | blood |
| 7 | chr20:52674800-52675800 | Enhancers | GM12878-XiMat | blood |
| 8 | chr20:52674800-52677600 | Weak transcription | NHDF-Ad | bronchial |
| 9 | chr20:52675000-52677400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 10 | chr20:52675000-52683000 | Weak transcription | HepG2 | liver |
| 11 | chr20:52675200-52678800 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 12 | chr20:52675400-52679200 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 13 | chr20:52675600-52679200 | Weak transcription | K562 | blood |
| 14 | chr20:52675600-52679600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
