Variant report

Variant rs2939305
Chromosome Location chr12:56965006-56965007
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:56948600-56981200 Weak transcription Brain Cingulate Gyrus brain
2 chr12:56950800-56975000 Weak transcription Esophagus oesophagus
3 chr12:56952600-56966200 Weak transcription Fetal Brain Female brain
4 chr12:56952600-56974800 Weak transcription Pancreas Pancrea
5 chr12:56953200-56981200 Weak transcription Brain Substantia Nigra brain
6 chr12:56954400-56974800 Weak transcription Brain Inferior Temporal Lobe brain
7 chr12:56954600-56993400 Weak transcription Fetal Brain Male brain
8 chr12:56956000-56968800 Strong transcription NHEK skin
9 chr12:56956200-56970400 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr12:56956600-56975000 Weak transcription Gastric stomach
11 chr12:56958400-56967400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr12:56959400-56970000 Weak transcription ES-WA7 Cell Line embryonic stem cell
13 chr12:56959600-56975000 Weak transcription Right Ventricle heart
14 chr12:56959800-56970400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr12:56959800-56971800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr12:56959800-56974800 Weak transcription HUES48 Cell Line embryonic stem cell
17 chr12:56959800-56975000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr12:56959800-56981400 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr12:56960000-56967400 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr12:56960000-56968000 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr12:56960000-56974800 Weak transcription Aorta Aorta
22 chr12:56960000-56975000 Weak transcription Small Intestine intestine
23 chr12:56960000-56975200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr12:56960000-56975800 Weak transcription Colonic Mucosa Colon
25 chr12:56960000-56976000 Weak transcription iPS-18 Cell Line embryonic stem cell
26 chr12:56960000-56981000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr12:56960000-56981200 Weak transcription H1 Cell Line embryonic stem cell
28 chr12:56960000-56981200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr12:56960000-56981200 Weak transcription H9 Cell Line embryonic stem cell
30 chr12:56960000-56981200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr12:56960000-56987600 Weak transcription Fetal Heart heart
32 chr12:56960400-56981000 Weak transcription Rectal Smooth Muscle rectum
33 chr12:56960800-56965600 Genic enhancers Fetal Muscle Leg muscle
34 chr12:56961200-56966000 Genic enhancers Fetal Stomach stomach
35 chr12:56961200-56966800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr12:56961200-56967200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:56961600-56981200 Weak transcription Brain Angular Gyrus brain
38 chr12:56961800-56966800 Strong transcription HSMM muscle
39 chr12:56962200-56975000 Weak transcription Ovary ovary
40 chr12:56962400-56965200 Strong transcription A549 lung
41 chr12:56962800-56965200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr12:56962800-56965200 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr12:56962800-56965400 Enhancers Primary hematopoietic stem cells short term culture blood
44 chr12:56962800-56965400 Enhancers Placenta Amnion Placenta Amnion
45 chr12:56962800-56965600 Enhancers Fetal Thymus thymus
46 chr12:56962800-56965800 Strong transcription NHLF lung
47 chr12:56962800-56966800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr12:56962800-56967000 Strong transcription Stomach Smooth Muscle stomach
49 chr12:56962800-56969600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr12:56963000-56965200 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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