Variant report

Variant rs2945916
Chromosome Location chr8:8127569-8127570
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:8117600-8131200 Weak transcription Placenta Amnion Placenta Amnion
2 chr8:8120200-8127800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr8:8120200-8128000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr8:8120800-8131400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr8:8123800-8127600 Weak transcription Fetal Lung lung
6 chr8:8123800-8128000 Weak transcription Ovary ovary
7 chr8:8124600-8128000 Enhancers NHEK skin
8 chr8:8124600-8128800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr8:8124600-8128800 Enhancers HMEC breast
10 chr8:8125600-8127600 Enhancers A549 lung
11 chr8:8125600-8128600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr8:8125800-8128600 Enhancers Fetal Intestine Large intestine
13 chr8:8125800-8128800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr8:8125800-8128800 Enhancers Rectal Mucosa Donor 31 rectum
15 chr8:8125800-8128800 Enhancers HUVEC blood vessel
16 chr8:8125800-8129200 Enhancers Fetal Intestine Small intestine
17 chr8:8125800-8129800 Enhancers Stomach Mucosa stomach
18 chr8:8126200-8127800 Enhancers Gastric stomach
19 chr8:8126200-8128000 Enhancers Small Intestine intestine
20 chr8:8126200-8128200 Enhancers Pancreas Pancrea
21 chr8:8126400-8127600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr8:8126400-8127800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr8:8126600-8127600 Enhancers Duodenum Mucosa Duodenum
24 chr8:8126600-8127600 Weak transcription NH-A brain
25 chr8:8126600-8128000 Weak transcription Osteobl bone
26 chr8:8126600-8129600 Enhancers Rectal Mucosa Donor 29 rectum
27 chr8:8126800-8127800 Enhancers Sigmoid Colon Sigmoid Colon
28 chr8:8126800-8128000 Enhancers Esophagus oesophagus
29 chr8:8127000-8127600 Enhancers Hela-S3 cervix
30 chr8:8127000-8130600 Enhancers Liver Liver
31 chr8:8127000-8131000 Weak transcription GM12878-XiMat blood
32 chr8:8127400-8128000 Flanking Active TSS HepG2 liver
33 chr8:8127400-8128600 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr8:8127400-8128600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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