Variant report

Variant	rs2948258
Chromosome Location	chr7:96441195-96441196
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2922915	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2922916	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2948264	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2948265	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2948266	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2948267	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2948268	0.90[EUR][1000 genomes]
rs2969427	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2969429	1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5857	chr7:96440164-96494110	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:96441000-96441200	Enhancers	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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