Variant report

No.	Distal block	Cell Line	Cell type
1	chr8:126441090..126444547-chr8:126489407..126493139,4	MCF-7	breast:
2	chr8:126440471..126443261-chr8:126490513..126492965,2	K562	blood:
3	chr8:126490852..126493614-chr8:126495231..126496917,2	K562	blood:
4	chr8:126487201..126489383-chr8:126491210..126493652,2	K562	blood:
5	chr8:126487883..126490527-chr8:126491210..126493645,2	K562	blood:
6	chr8:126490839..126493464-chr8:126493478..126495853,2	MCF-7	breast:
7	chr8:126440590..126444026-chr8:126489711..126492773,5	K562	blood:

Variant related genes	Relation type
ENSG00000173334	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs17321515	0.90[YRI][hapmap]
rs2001845	0.80[CHB][hapmap];0.89[JPT][hapmap];0.86[ASN][1000 genomes]
rs2954018	0.81[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2954020	0.88[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2954025	0.92[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap];0.90[YRI][hapmap];0.93[ASN][1000 genomes]
rs2954026	0.86[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2954028	0.86[ASN][1000 genomes]
rs2954032	0.87[ASN][1000 genomes]
rs2954033	0.88[ASN][1000 genomes]
rs2980858	0.82[ASN][1000 genomes]
rs2980859	0.82[ASN][1000 genomes]
rs2980862	0.81[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2980867	0.81[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2980869	0.90[YRI][hapmap]
rs2980878	0.86[CEU][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2980879	0.89[CEU][hapmap];0.81[CHB][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]
rs2980880	0.86[ASN][1000 genomes]
rs2980884	0.84[CEU][hapmap]
rs4336630	0.93[ASN][1000 genomes]
rs4351435	0.82[ASN][1000 genomes]
rs4871603	0.93[ASN][1000 genomes]
rs7828113	0.92[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap];0.90[YRI][hapmap];0.93[ASN][1000 genomes]
rs7846466	0.86[CEU][hapmap];0.90[JPT][hapmap];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891437	chr8:126470817-126629328	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv3345362	chr8:126489195-126491743	Enhancers Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	esv3428781	chr8:126489395-126491618	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:126483000-126498200	Weak transcription	Right Atrium	heart
2	chr8:126483400-126496600	Weak transcription	Hela-S3	cervix
3	chr8:126487200-126492400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr8:126487600-126491800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr8:126487600-126492000	Weak transcription	NHEK	skin
6	chr8:126487600-126493200	Weak transcription	HMEC	breast
7	chr8:126487600-126496600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr8:126488000-126497200	Weak transcription	Liver	Liver
9	chr8:126489600-126493400	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr8:126489800-126491400	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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