Variant report

Variant rs2954756
Chromosome Location chr17:15339283-15339284
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:15326000-15340200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr17:15326400-15340600 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr17:15326600-15340200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr17:15328800-15339600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr17:15329000-15339400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
6 chr17:15329800-15340000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr17:15331000-15339400 Weak transcription Esophagus oesophagus
8 chr17:15332800-15340400 Enhancers Fetal Muscle Leg muscle
9 chr17:15333000-15340600 Weak transcription H9 Cell Line embryonic stem cell
10 chr17:15333000-15340600 Weak transcription Aorta Aorta
11 chr17:15333000-15340600 Weak transcription Thymus Thymus
12 chr17:15333400-15340400 Enhancers Fetal Stomach stomach
13 chr17:15333600-15361000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr17:15334200-15339600 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr17:15334600-15339400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr17:15335000-15339400 Weak transcription Brain Angular Gyrus brain
17 chr17:15335000-15339400 Weak transcription Brain Anterior Caudate brain
18 chr17:15335000-15339400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr17:15335000-15339600 Weak transcription Brain Cingulate Gyrus brain
20 chr17:15335200-15339600 Weak transcription Muscle Satellite Cultured Cells --
21 chr17:15335400-15339400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr17:15335400-15340400 Enhancers Placenta Placenta
23 chr17:15335400-15343000 Enhancers Fetal Intestine Large intestine
24 chr17:15335600-15340400 Enhancers Fetal Intestine Small intestine
25 chr17:15335600-15348000 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr17:15335800-15339800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr17:15335800-15340600 Enhancers Fetal Lung lung
28 chr17:15336200-15339600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr17:15336200-15339800 Weak transcription Brain Germinal Matrix brain
30 chr17:15336200-15340400 Enhancers NHDF-Ad bronchial
31 chr17:15336200-15340800 Enhancers Adipose Nuclei Adipose
32 chr17:15336400-15339800 Weak transcription Spleen Spleen
33 chr17:15336400-15340200 Enhancers HSMMtube muscle
34 chr17:15336600-15339800 Weak transcription Hela-S3 cervix
35 chr17:15336600-15340200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr17:15336600-15341000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr17:15336600-15345200 Enhancers Fetal Heart heart
38 chr17:15336600-15347600 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr17:15336800-15339800 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr17:15337000-15339400 Weak transcription Osteobl bone
41 chr17:15337000-15339800 Weak transcription Primary T cells fromperipheralblood blood
42 chr17:15337000-15339800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
43 chr17:15337000-15339800 Weak transcription Gastric stomach
44 chr17:15337200-15340000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr17:15337400-15339800 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr17:15337600-15339400 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr17:15337600-15339600 Enhancers Liver Liver
48 chr17:15337600-15339600 Weak transcription Colonic Mucosa Colon
49 chr17:15337800-15339400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr17:15337800-15340200 Weak transcription H1 Cell Line embryonic stem cell

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