Variant report

Variant rs2960328
Chromosome Location chr19:39006714-39006715
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:29 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:38960800-39034400 Strong transcription Skeletal Muscle Female skeletal muscle
2 chr19:38963000-39033000 Strong transcription Skeletal Muscle Male skeletal muscle
3 chr19:38985200-39081800 Weak transcription Psoas Muscle Psoas
4 chr19:38996200-39007800 Weak transcription Right Atrium heart
5 chr19:38997600-39007000 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr19:38997600-39025400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr19:38998600-39025000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr19:39000000-39013400 Weak transcription H9 Cell Line embryonic stem cell
9 chr19:39001000-39025600 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr19:39001600-39007200 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr19:39005200-39006800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
12 chr19:39005200-39006800 Enhancers Primary T regulatory cells fromperipheralblood blood
13 chr19:39005200-39008200 Strong transcription HSMMtube muscle
14 chr19:39005400-39006800 Bivalent Enhancer Primary T cells fromperipheralblood blood
15 chr19:39005600-39006800 Enhancers Brain Substantia Nigra brain
16 chr19:39005600-39006800 Genic enhancers Fetal Muscle Leg muscle
17 chr19:39005600-39007000 Enhancers Cortex derived primary cultured neurospheres brain
18 chr19:39005800-39007400 Enhancers Brain Germinal Matrix brain
19 chr19:39005800-39025200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr19:39006200-39006800 Enhancers Brain Hippocampus Middle brain
21 chr19:39006200-39009600 Weak transcription Placenta Placenta
22 chr19:39006200-39025400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr19:39006400-39006800 Flanking Active TSS Brain Cingulate Gyrus brain
24 chr19:39006400-39007000 Active TSS Brain Inferior Temporal Lobe brain
25 chr19:39006400-39016400 Strong transcription Fetal Muscle Trunk muscle
26 chr19:39006600-39006800 Flanking Active TSS Brain Anterior Caudate brain
27 chr19:39006600-39008000 Strong transcription HUES48 Cell Line embryonic stem cell
28 chr19:39006600-39008600 Strong transcription H1 Cell Line embryonic stem cell
29 chr19:39006600-39008600 Strong transcription iPS-15b Cell Line embryonic stem cell

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