Variant report
| Variant | rs2962517 |
|---|---|
| Chromosome Location | chr5:145413159-145413160 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:145373400-145428400 | Weak transcription | Fetal Stomach | stomach |
| 2 | chr5:145397200-145418800 | Weak transcription | Liver | Liver |
| 3 | chr5:145405000-145416800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 4 | chr5:145407200-145420000 | Weak transcription | Colonic Mucosa | Colon |
| 5 | chr5:145407600-145421600 | Weak transcription | NH-A | brain |
| 6 | chr5:145407800-145415600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 7 | chr5:145408200-145415200 | Weak transcription | Fetal Intestine Large | intestine |
| 8 | chr5:145408200-145418400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 9 | chr5:145408200-145420000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr5:145408400-145417200 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 11 | chr5:145408400-145418400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 12 | chr5:145408400-145420000 | Weak transcription | Gastric | stomach |
| 13 | chr5:145408600-145419200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 14 | chr5:145408600-145419400 | Weak transcription | HMEC | breast |
| 15 | chr5:145409200-145413800 | Weak transcription | Aorta | Aorta |
| 16 | chr5:145409800-145418600 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 17 | chr5:145409800-145420000 | Weak transcription | Esophagus | oesophagus |
| 18 | chr5:145410000-145416600 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 19 | chr5:145412000-145413400 | Enhancers | Placenta | Placenta |
| 20 | chr5:145412200-145413200 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 21 | chr5:145412200-145413800 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 22 | chr5:145412400-145413800 | Weak transcription | NHEK | skin |
| 23 | chr5:145412600-145453200 | Weak transcription | Pancreas | Pancrea |
| 24 | chr5:145412800-145413200 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 25 | chr5:145412800-145414800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 26 | chr5:145412800-145419400 | Weak transcription | Stomach Mucosa | stomach |
| 27 | chr5:145413000-145416400 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 28 | chr5:145413000-145417000 | Strong transcription | Fetal Intestine Small | intestine |
