The 2.0 version of rSNPBase

Variant report

Variant rs2964947
Chromosome Location chr7:47510845-47510846
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:47480400-47534000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr7:47494800-47511000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr7:47494800-47511800 Weak transcription Primary B cells from peripheral blood blood
4 chr7:47498200-47514000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr7:47500400-47514400 Weak transcription Placenta Amnion Placenta Amnion
6 chr7:47501400-47511200 Weak transcription NHLF lung
7 chr7:47501400-47514000 Weak transcription Fetal Brain Male brain
8 chr7:47501600-47511000 Weak transcription NH-A brain
9 chr7:47505000-47513800 Weak transcription HSMMtube muscle
10 chr7:47505200-47511600 Weak transcription Stomach Smooth Muscle stomach
11 chr7:47505200-47512400 Weak transcription Spleen Spleen
12 chr7:47506000-47513800 Genic enhancers Fetal Intestine Small intestine
13 chr7:47506400-47513000 Weak transcription Fetal Heart heart
14 chr7:47506400-47514000 Weak transcription Left Ventricle heart
15 chr7:47506400-47514000 Weak transcription Psoas Muscle Psoas
16 chr7:47506400-47514400 Weak transcription Fetal Muscle Leg muscle
17 chr7:47506800-47511000 Weak transcription Right Atrium heart
18 chr7:47506800-47512400 Weak transcription Aorta Aorta
19 chr7:47506800-47514000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr7:47507600-47513800 Weak transcription Right Ventricle heart
21 chr7:47507600-47513800 Weak transcription Small Intestine intestine
22 chr7:47508000-47513600 Weak transcription Ovary ovary
23 chr7:47509000-47511400 Enhancers Rectal Mucosa Donor 31 rectum
24 chr7:47509200-47511000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr7:47509200-47513200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
26 chr7:47509400-47513200 Strong transcription Primary hematopoietic stem cells short term culture blood
27 chr7:47509600-47511800 Strong transcription Primary B cells from cord blood blood
28 chr7:47509600-47511800 Flanking Active TSS HepG2 liver
29 chr7:47509600-47513400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr7:47509800-47511200 Enhancers Duodenum Mucosa Duodenum
31 chr7:47509800-47511400 Transcr. at gene 5' and 3' A549 lung
32 chr7:47510000-47511200 Enhancers H9 Cell Line embryonic stem cell
33 chr7:47510000-47511200 Enhancers Breast Myoepithelial Primary Cells Breast
34 chr7:47510000-47511400 Enhancers Colonic Mucosa Colon
35 chr7:47510000-47511600 Enhancers H1 Cell Line embryonic stem cell
36 chr7:47510000-47511600 Enhancers HUES48 Cell Line embryonic stem cell
37 chr7:47510000-47512000 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr7:47510000-47512200 Enhancers HUES64 Cell Line embryonic stem cell
39 chr7:47510000-47512400 Enhancers HUES6 Cell Line embryonic stem cell
40 chr7:47510000-47512600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
41 chr7:47510000-47512800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
42 chr7:47510000-47512800 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr7:47510000-47512800 Genic enhancers Placenta Placenta
44 chr7:47510000-47513000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr7:47510000-47513400 Strong transcription Fetal Stomach stomach
46 chr7:47510000-47513800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
47 chr7:47510200-47511000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr7:47510200-47511000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr7:47510200-47511000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
50 chr7:47510200-47511000 Enhancers Sigmoid Colon Sigmoid Colon

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015