Variant report

Variant rs2987874
Chromosome Location chr1:174770191-174770192
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174768200-174770400 Active TSS Stomach Smooth Muscle stomach
2 chr1:174768400-174770400 Active TSS Brain Substantia Nigra brain
3 chr1:174768400-174770800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr1:174768400-174772000 Active TSS Brain Cingulate Gyrus brain
5 chr1:174768400-174772200 Active TSS Brain Inferior Temporal Lobe brain
6 chr1:174768400-174772600 Active TSS Brain Angular Gyrus brain
7 chr1:174768400-174773000 Active TSS Brain Dorsolateral Prefrontal Cortex brain
8 chr1:174768600-174770800 Active TSS Fetal Stomach stomach
9 chr1:174768600-174771200 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:174768600-174771200 Active TSS Brain Germinal Matrix brain
11 chr1:174768600-174771400 Active TSS HSMMtube muscle
12 chr1:174768600-174771600 Active TSS Pancreatic Islets Pancreatic Islet
13 chr1:174768600-174772600 Active TSS Brain Anterior Caudate brain
14 chr1:174768800-174770400 Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:174768800-174770400 Active TSS Duodenum Smooth Muscle Duodenum
16 chr1:174768800-174770400 Active TSS Fetal Kidney kidney
17 chr1:174768800-174770800 Active TSS Cortex derived primary cultured neurospheres brain
18 chr1:174768800-174770800 Active TSS Fetal Brain Male brain
19 chr1:174769000-174770400 Active TSS ES-WA7 Cell Line embryonic stem cell
20 chr1:174769200-174770200 Flanking Active TSS Primary B cells from cord blood blood
21 chr1:174769400-174770200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:174769400-174770200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
23 chr1:174769400-174770200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:174769400-174770200 Flanking Active TSS Duodenum Mucosa Duodenum
25 chr1:174769400-174770400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
26 chr1:174769400-174770400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
27 chr1:174769400-174770400 Flanking Active TSS Fetal Intestine Small intestine
28 chr1:174769400-174770600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
29 chr1:174769600-174770200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
30 chr1:174769600-174770200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
31 chr1:174769600-174781200 Weak transcription K562 blood
32 chr1:174769800-174770200 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:174769800-174770200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr1:174769800-174770200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr1:174769800-174770400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
36 chr1:174769800-174778200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:174769800-174787600 Weak transcription Pancreas Pancrea
38 chr1:174770000-174770200 Enhancers H1 Cell Line embryonic stem cell
39 chr1:174770000-174770200 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:174770000-174770200 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
41 chr1:174770000-174770200 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
42 chr1:174770000-174770200 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:174770000-174770200 Enhancers Primary T cells from cord blood blood
44 chr1:174770000-174770200 Active TSS Primary T cells fromperipheralblood blood
45 chr1:174770000-174770200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:174770000-174770200 Active TSS Aorta Aorta
47 chr1:174770000-174770200 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr1:174770000-174770200 Active TSS Fetal Intestine Large intestine
49 chr1:174770000-174770200 Active TSS Fetal Lung lung
50 chr1:174770000-174770200 Enhancers Dnd41 blood

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