Variant report

Variant rs2993579
Chromosome Location chr13:95954698-95954699
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:95952400-95954800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr13:95952400-95954800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
3 chr13:95952800-95954800 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
4 chr13:95953800-95954800 Flanking Active TSS Stomach Smooth Muscle stomach
5 chr13:95953800-95955400 Flanking Active TSS K562 blood
6 chr13:95954000-95954800 Flanking Active TSS Primary T helper cells PMA-I stimulated --
7 chr13:95954000-95954800 Flanking Active TSS GM12878-XiMat blood
8 chr13:95954000-95954800 Flanking Active TSS Hela-S3 cervix
9 chr13:95954000-95955400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
10 chr13:95954200-95954800 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
11 chr13:95954200-95954800 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
12 chr13:95954200-95954800 Enhancers Lung lung
13 chr13:95954400-95954800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr13:95954400-95954800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
15 chr13:95954400-95954800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
16 chr13:95954400-95954800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr13:95954400-95954800 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
18 chr13:95954400-95954800 Bivalent Enhancer Fetal Brain Male brain
19 chr13:95954400-95955200 Bivalent Enhancer Brain Germinal Matrix brain
20 chr13:95954400-95955400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr13:95954400-95956600 Weak transcription Right Atrium heart
22 chr13:95954600-95954800 Bivalent Enhancer iPS-18 Cell Line embryonic stem cell
23 chr13:95954600-95954800 Bivalent Enhancer Primary B cells from peripheral blood blood
24 chr13:95954600-95954800 Active TSS Primary T cells from cord blood blood
25 chr13:95954600-95954800 Bivalent Enhancer Primary T cells fromperipheralblood blood
26 chr13:95954600-95954800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
27 chr13:95954600-95954800 Enhancers Primary T helper naive cells from peripheral blood blood
28 chr13:95954600-95954800 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr13:95954600-95954800 Enhancers Primary T regulatory cells fromperipheralblood blood
30 chr13:95954600-95954800 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
31 chr13:95954600-95954800 Enhancers Primary T killer naive cells fromperipheralblood blood
32 chr13:95954600-95954800 Enhancers Fetal Intestine Large intestine
33 chr13:95954600-95954800 Enhancers Skeletal Muscle Female skeletal muscle
34 chr13:95954600-95954800 Transcr. at gene 5' and 3' A549 lung
35 chr13:95954600-95954800 Enhancers HMEC breast
36 chr13:95954600-95954800 Enhancers HUVEC blood vessel
37 chr13:95954600-95955200 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr13:95954600-95955200 Enhancers Primary T helper cells fromperipheralblood blood
39 chr13:95954600-95955200 Enhancers Brain Substantia Nigra brain
40 chr13:95954600-95955600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr13:95954600-95956000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr13:95954600-95957800 Enhancers Fetal Intestine Small intestine
43 chr13:95954600-95958200 Weak transcription NHLF lung

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