Variant report

Variant	rs2994432
Chromosome Location	chr1:85189864-85189865
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:78544669..78546952-chr1:85187355..85190224,2	K562	blood:
2	chr1:85154995..85157409-chr1:85188243..85190104,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000117155	Chromatin interaction

rs_ID	r²[population]
rs2911585	0.83[YRI][hapmap];1.00[AMR][1000 genomes]
rs2994428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2994431	0.82[YRI][hapmap];1.00[AMR][1000 genomes]
rs2994447	0.83[YRI][hapmap]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:85181800-85190200	Weak transcription	HUES64 Cell Line	embryonic stem cell
2	chr1:85184200-85190000	Enhancers	Fetal Intestine Large	intestine
3	chr1:85186600-85190600	Enhancers	HepG2	liver
4	chr1:85187200-85192000	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr1:85187400-85191600	Weak transcription	Fetal Muscle Leg	muscle
6	chr1:85187400-85191800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr1:85187400-85192000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr1:85187400-85192000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr1:85187400-85192000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr1:85187400-85192000	Weak transcription	NHEK	skin
11	chr1:85187400-85192400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr1:85187400-85192600	Weak transcription	Fetal Lung	lung
13	chr1:85187400-85193000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr1:85187600-85191800	Weak transcription	NHLF	lung
15	chr1:85187600-85192400	Weak transcription	Colon Smooth Muscle	Colon
16	chr1:85187600-85192800	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr1:85188600-85191200	Weak transcription	Duodenum Mucosa	Duodenum
18	chr1:85188800-85190000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
19	chr1:85189400-85190600	Enhancers	K562	blood
20	chr1:85189400-85191000	Enhancers	Liver	Liver
21	chr1:85189400-85191800	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr1:85189400-85192200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr1:85189600-85190000	Enhancers	HUES48 Cell Line	embryonic stem cell
24	chr1:85189600-85191200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr1:85189600-85191400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
26	chr1:85189600-85192000	Weak transcription	Osteobl	bone
27	chr1:85189800-85190200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
28	chr1:85189800-85191800	Weak transcription	NHDF-Ad	bronchial
29	chr1:85189800-85192400	Weak transcription	Rectal Smooth Muscle	rectum

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