Variant report

Variant rs3002601
Chromosome Location chr6:114319540-114319541
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:114311800-114332400 Weak transcription Fetal Brain Female brain
2 chr6:114314600-114331200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr6:114316200-114320000 Enhancers HUVEC blood vessel
4 chr6:114317000-114319600 Active TSS HSMMtube muscle
5 chr6:114317000-114323400 Weak transcription iPS-20b Cell Line embryonic stem cell
6 chr6:114317200-114319600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:114317200-114319600 Weak transcription Brain Inferior Temporal Lobe brain
8 chr6:114317200-114320800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr6:114317200-114323000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
10 chr6:114317200-114323400 Weak transcription Brain Germinal Matrix brain
11 chr6:114317200-114323600 Weak transcription H9 Cell Line embryonic stem cell
12 chr6:114317200-114328200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr6:114317400-114321400 Weak transcription Stomach Mucosa stomach
14 chr6:114317400-114322000 Enhancers Brain Hippocampus Middle brain
15 chr6:114317400-114328400 Weak transcription HUES64 Cell Line embryonic stem cell
16 chr6:114317800-114321000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr6:114317800-114321000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr6:114318000-114323000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr6:114318200-114320000 Enhancers Brain Substantia Nigra brain
20 chr6:114318600-114319600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
21 chr6:114318600-114322000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
22 chr6:114318800-114319600 Enhancers Brain Anterior Caudate brain
23 chr6:114318800-114319800 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr6:114318800-114320000 Weak transcription Hela-S3 cervix
25 chr6:114318800-114322400 Enhancers NHDF-Ad bronchial
26 chr6:114318800-114323000 Weak transcription Fetal Muscle Leg muscle
27 chr6:114318800-114331600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:114319000-114319800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:114319000-114319800 Enhancers Muscle Satellite Cultured Cells --
30 chr6:114319000-114321200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr6:114319000-114321200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:114319200-114320000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr6:114319200-114320800 Enhancers Brain Angular Gyrus brain
34 chr6:114319200-114321000 Genic enhancers HSMM muscle
35 chr6:114319200-114321200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:114319200-114321200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr6:114319200-114321600 Weak transcription Brain Cingulate Gyrus brain
38 chr6:114319200-114321600 Weak transcription NHLF lung
39 chr6:114319200-114321600 Weak transcription Osteobl bone
40 chr6:114319200-114328600 Weak transcription NH-A brain

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