The 2.0 version of rSNPBase

Variant report

Variant rs3012147
Chromosome Location chr13:40328840-40328841
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:40255800-40340200 Weak transcription Psoas Muscle Psoas
2 chr13:40267600-40341200 Weak transcription Rectal Smooth Muscle rectum
3 chr13:40286200-40332200 Weak transcription Esophagus oesophagus
4 chr13:40293000-40340800 Weak transcription Colon Smooth Muscle Colon
5 chr13:40293600-40329000 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr13:40294200-40339200 Weak transcription Fetal Brain Male brain
7 chr13:40297600-40339800 Weak transcription Brain Hippocampus Middle brain
8 chr13:40297800-40329800 Weak transcription Brain Inferior Temporal Lobe brain
9 chr13:40304600-40340000 Weak transcription Osteobl bone
10 chr13:40307600-40329400 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr13:40309200-40331400 Weak transcription Stomach Mucosa stomach
12 chr13:40309200-40334600 Weak transcription HepG2 liver
13 chr13:40311400-40347200 Weak transcription HSMM muscle
14 chr13:40311600-40329400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr13:40311600-40331200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr13:40311600-40339800 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr13:40311600-40340000 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr13:40311800-40331000 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr13:40311800-40339800 Weak transcription Brain Anterior Caudate brain
20 chr13:40311800-40340000 Weak transcription Ovary ovary
21 chr13:40312000-40340000 Weak transcription Brain Angular Gyrus brain
22 chr13:40312200-40329000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr13:40312200-40329800 Weak transcription Aorta Aorta
24 chr13:40312200-40331800 Weak transcription Left Ventricle heart
25 chr13:40312200-40333000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr13:40312200-40340000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr13:40312200-40340000 Weak transcription Pancreas Pancrea
28 chr13:40312200-40340200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr13:40312200-40351200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr13:40312400-40329400 Weak transcription Primary monocytes fromperipheralblood blood
31 chr13:40312400-40329400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr13:40312400-40329800 Weak transcription Fetal Stomach stomach
33 chr13:40314600-40331400 Weak transcription Primary B cells from cord blood blood
34 chr13:40315000-40340200 Weak transcription Muscle Satellite Cultured Cells --
35 chr13:40315200-40330600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
36 chr13:40315400-40329000 Weak transcription Fetal Kidney kidney
37 chr13:40320600-40329400 Weak transcription Primary hematopoietic stem cells blood
38 chr13:40323000-40329400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr13:40325000-40330000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
40 chr13:40325000-40330400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr13:40325200-40334400 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr13:40325600-40329000 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr13:40325800-40339800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
44 chr13:40326000-40329000 Weak transcription Primary B cells from peripheral blood blood
45 chr13:40326200-40329000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr13:40326200-40329400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr13:40326200-40331400 Weak transcription Fetal Muscle Trunk muscle
48 chr13:40326200-40339400 Weak transcription Adipose Nuclei Adipose
49 chr13:40326400-40334400 Weak transcription Liver Liver
50 chr13:40327200-40331800 Weak transcription Breast Myoepithelial Primary Cells Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015