Variant report

Variant rs30410
Chromosome Location chr16:79627692-79627693
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:79622200-79631400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr16:79623800-79629200 Weak transcription Aorta Aorta
3 chr16:79624000-79628800 Weak transcription Colon Smooth Muscle Colon
4 chr16:79624000-79629000 Weak transcription Rectal Smooth Muscle rectum
5 chr16:79624000-79629800 Weak transcription Fetal Muscle Trunk muscle
6 chr16:79624400-79629000 Weak transcription Ovary ovary
7 chr16:79624800-79629000 Weak transcription Primary T cells fromperipheralblood blood
8 chr16:79624800-79629600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr16:79624800-79630000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr16:79624800-79630800 Weak transcription H1 Cell Line embryonic stem cell
11 chr16:79624800-79631400 Weak transcription Esophagus oesophagus
12 chr16:79624800-79632400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr16:79625000-79628000 Weak transcription Placenta Placenta
14 chr16:79625000-79628600 Weak transcription Fetal Intestine Small intestine
15 chr16:79625000-79629200 Enhancers HUES48 Cell Line embryonic stem cell
16 chr16:79625400-79628400 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr16:79625400-79628400 Weak transcription Fetal Intestine Large intestine
18 chr16:79625800-79627800 Active TSS Brain Inferior Temporal Lobe brain
19 chr16:79625800-79636800 Active TSS Psoas Muscle Psoas
20 chr16:79626000-79628600 Genic enhancers Cortex derived primary cultured neurospheres brain
21 chr16:79626200-79628600 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr16:79626400-79628800 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr16:79626400-79629400 Active TSS Rectal Mucosa Donor 29 rectum
24 chr16:79626400-79631800 Weak transcription H9 Cell Line embryonic stem cell
25 chr16:79626600-79628400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr16:79626600-79628600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr16:79626600-79629200 Weak transcription Fetal Stomach stomach
28 chr16:79626600-79632400 Active TSS Skeletal Muscle Male skeletal muscle
29 chr16:79626800-79627800 Active TSS Right Atrium heart
30 chr16:79626800-79628000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr16:79626800-79628000 Flanking Active TSS Liver Liver
32 chr16:79626800-79628800 Weak transcription Fetal Kidney kidney
33 chr16:79626800-79629200 Flanking Active TSS Adipose Nuclei Adipose
34 chr16:79626800-79636400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
35 chr16:79627000-79627800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr16:79627000-79628200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
37 chr16:79627200-79628000 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
38 chr16:79627200-79628400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
39 chr16:79627200-79628400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr16:79627200-79628800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
41 chr16:79627200-79629000 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr16:79627200-79633000 Transcr. at gene 5' and 3' Fetal Lung lung
43 chr16:79627200-79635600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
44 chr16:79627400-79628000 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
45 chr16:79627400-79628000 Active TSS Brain Angular Gyrus brain
46 chr16:79627400-79628200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr16:79627400-79628200 Strong transcription Fetal Muscle Leg muscle
48 chr16:79627400-79628400 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr16:79627400-79628800 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr16:79627400-79628800 Weak transcription Stomach Smooth Muscle stomach

Quick Search:


  
Input of quick search could be:

what's new

Quick links