Variant report

Variant	rs3088174
Chromosome Location	chr7:64451426-64451427
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2)
CpG islands
(count:122)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TCF7L2	chr7:64450554-64451487	HCT-116	colon:	n/a	n/a
2	POLR2A	chr7:64450474-64460656	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:64451426-64451476	HCPEpiC	choroid plexus:	n/a
2	chr7:64451414-64451464	PrEC	prostate:	n/a
3	chr7:64451414-64451464	BE2_C	brain:	n/a
4	chr7:64451426-64451476	U87	brain:	n/a
5	chr7:64451414-64451464	HCT-116	colon:	n/a
6	chr7:64451426-64451476	NT2-D1	testis:	n/a
7	chr7:64451426-64451476	H1-hESC	embryonic stem cell:	embryo
8	chr7:64451414-64451464	AoSMC	blood vessel:	n/a
9	chr7:64451426-64451476	HPAEpiC	pulmonary alveolar:	n/a
10	chr7:64451426-64451476	LNCaP	prostate:	n/a
11	chr7:64451426-64451476	HIPEpiC	eye:	n/a
12	chr7:64451426-64451476	HAEpiC	amniotic membrane:	n/a
13	chr7:64451426-64451476	HMEC	breast:	n/a
14	chr7:64451414-64451464	U87	brain:	n/a
15	chr7:64451426-64451476	GM12891	blood:	n/a
16	chr7:64451414-64451464	HepG2	liver:	n/a
17	chr7:64451414-64451464	AG09309	skin:	n/a
18	chr7:64451426-64451476	BJ	skin:	n/a
19	chr7:64451426-64451476	HCM	heart:	n/a
20	chr7:64451414-64451464	HEK293	kidney:	embryo
21	chr7:64451414-64451464	Hela-S3	cervix:	n/a
22	chr7:64451414-64451464	H1-hESC	embryonic stem cell:	embryo
23	chr7:64451426-64451476	HRPEpiC	eye:	n/a
24	chr7:64451414-64451464	T-47D	breast:	n/a
25	chr7:64451426-64451476	PrEC	prostate:	n/a
26	chr7:64451414-64451464	HRE	kidney:	n/a
27	chr7:64451414-64451464	SAEC	small airway:	n/a
28	chr7:64451426-64451476	AG09309	skin:	n/a
29	chr7:64451414-64451464	ECC-1	luminal epithelium:	n/a
30	chr7:64451414-64451464	AG10803	skin:	n/a
31	chr7:64451414-64451464	Jurkat	blood:	n/a
32	chr7:64451426-64451476	GM12892	blood:	n/a
33	chr7:64451426-64451476	SK-N-SH	brain:	n/a
34	chr7:64451426-64451476	GM06990	blood:	n/a
35	chr7:64451414-64451464	NH-A	brain:	n/a
36	chr7:64451426-64451476	MCF10A-Er-Src	breast:	n/a
37	chr7:64451414-64451464	GM19239	blood:	n/a
38	chr7:64451426-64451476	PANC-1	pancreas:	n/a
39	chr7:64451414-64451464	HRCEpiC	kidney:	n/a
40	chr7:64451414-64451464	HUVEC	blood vessel:	n/a
41	chr7:64451426-64451476	ProgFib	skin:	n/a
42	chr7:64451426-64451476	HUVEC	blood vessel:	n/a
43	chr7:64451426-64451476	HepG2	liver:	n/a
44	chr7:64451414-64451464	AG09319	gingival:	n/a
45	chr7:64451414-64451464	MCF-7	breast:	n/a
46	chr7:64451426-64451476	AG09319	gingival:	n/a
47	chr7:64451414-64451464	Hepatocyte	liver:	n/a
48	chr7:64451426-64451476	AG10803	skin:	n/a
49	chr7:64451414-64451464	NT2-D1	testis:	n/a
50	chr7:64451414-64451464	PFSK-1	brain:	n/a

No data

Variant related genes	Relation type
ZNF117	TF binding region
ZNF117	CpG island

Extended variants
information (count: 107 )
Associated
traits (count: 37 )

rSNPs within LD-proxies of this variant (count:90)

rs_ID	r²[population]
rs10229485	0.81[AMR][1000 genomes]
rs10237971	0.90[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10243523	0.82[AMR][1000 genomes]
rs1060383	0.83[EUR][1000 genomes]
rs10949955	0.83[EUR][1000 genomes]
rs11760504	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11764811	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11769801	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11771269	0.85[EUR][1000 genomes]
rs11771529	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11978852	0.85[EUR][1000 genomes]
rs12056025	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12056103	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12530729	0.83[EUR][1000 genomes]
rs12538992	0.80[EUR][1000 genomes]
rs12670240	0.84[EUR][1000 genomes]
rs13222578	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs13226855	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs13229762	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs13233376	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs13238842	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs13243536	0.80[EUR][1000 genomes]
rs13244300	0.85[EUR][1000 genomes]
rs13245077	0.85[EUR][1000 genomes]
rs1540833	0.83[EUR][1000 genomes]
rs1852026	0.85[EUR][1000 genomes]
rs1967609	0.80[EUR][1000 genomes]
rs2091224	0.85[EUR][1000 genomes]
rs2103146	0.84[EUR][1000 genomes]
rs2103148	0.92[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs2140724	0.84[AFR][1000 genomes]
rs2419256	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28510371	0.88[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs28835689	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs28872832	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34171289	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34362307	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs34636014	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34639489	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35079894	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs35189858	0.84[EUR][1000 genomes]
rs35281840	0.83[EUR][1000 genomes]
rs35408058	0.86[AFR][1000 genomes]
rs35679667	0.92[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs35953728	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3807068	0.83[EUR][1000 genomes]
rs3807069	0.83[EUR][1000 genomes]
rs3823471	0.83[EUR][1000 genomes]
rs3982216	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4266535	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4379351	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4481471	0.94[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4718177	0.84[EUR][1000 genomes]
rs4718178	0.84[EUR][1000 genomes]
rs4718180	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4718187	0.81[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs4718188	0.80[AMR][1000 genomes]
rs55762719	0.80[AMR][1000 genomes]
rs55959098	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs56294715	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56303509	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs56340521	0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs57449421	0.87[AMR][1000 genomes];0.83[ASN][1000 genomes]
rs58134413	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs58562345	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs62455989	0.92[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs62456481	0.86[AFR][1000 genomes]
rs62457195	0.80[AMR][1000 genomes]
rs6460216	0.84[EUR][1000 genomes]
rs67499519	0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs67896886	0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6947903	0.83[AMR][1000 genomes]
rs6950807	0.86[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6955268	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6961678	0.80[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6962429	0.83[AMR][1000 genomes]
rs6965099	0.87[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6965753	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6968439	0.84[EUR][1000 genomes]
rs6978332	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7780100	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7789394	0.85[EUR][1000 genomes]
rs7803542	0.85[EUR][1000 genomes]
rs7806567	0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7807855	0.86[EUR][1000 genomes]
rs9638216	0.81[EUR][1000 genomes]
rs9638417	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9647852	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs9770557	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9770631	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2422405	chr7:63709739-64632341	Enhancers Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Strong transcription Bivalent/Poised TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
2	nsv464518	chr7:63881238-64506904	Enhancers ZNF genes & repeats Bivalent/Poised TSS Weak transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
3	nsv607312	chr7:63881238-64506904	Active TSS Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	43 gene(s)	inside rSNPs	diseases
4	nsv888275	chr7:63990100-64468590	Strong transcription Active TSS Weak transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
5	nsv888276	chr7:63990100-64511564	Strong transcription ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
6	nsv1022042	chr7:64226499-64566945	Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	34 gene(s)	inside rSNPs	diseases
7	nsv888282	chr7:64299645-64511564	Enhancers Genic enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
8	esv3506582	chr7:64323055-64563984	ZNF genes & repeats Weak transcription Enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
9	esv3506583	chr7:64323055-64563984	Enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Weak transcription Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	27 gene(s)	inside rSNPs	diseases
10	nsv1019180	chr7:64329889-64512842	Active TSS Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
11	nsv888283	chr7:64343985-64511564	Weak transcription Active TSS ZNF genes & repeats Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
12	esv2752165	chr7:64345822-65208605	Flanking Active TSS Bivalent/Poised TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	49 gene(s)	inside rSNPs	diseases
13	nsv888284	chr7:64406439-64562139	ZNF genes & repeats Weak transcription Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	22 gene(s)	inside rSNPs	diseases
14	nsv970505	chr7:64441807-64494987	ZNF genes & repeats Weak transcription Active TSS Genic enhancers Enhancers Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
15	nsv1033517	chr7:64443052-64942418	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS ZNF genes & repeats Strong transcription Enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
16	nsv538893	chr7:64443052-64942418	Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	inside rSNPs	diseases
17	esv3346218	chr7:64450915-64459952	Weak transcription Enhancers ZNF genes & repeats Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Active TSS	TF binding region CpG island Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

mRNA abundance (count:37)

SNP	Gene	Cis/trans	Tissue	Source
rs3088174	INTS4L1	cis	Skin Sun Exposed Lower leg	GTEx
rs3088174	CCT6P3	cis	Adipose Subcutaneous	GTEx
rs3088174	RP11-460N20.4	cis	Nerve Tibial	GTEx
rs3088174	ZNF273	cis	Thyroid	GTEx
rs3088174	RP11-797H7.3	cis	lung	GTEx
rs3088174	RP11-460N20.4	cis	Adipose Subcutaneous	GTEx
rs3088174	RP11-460N20.4	cis	Esophagus Mucosa	GTEx
rs3088174	ZNF273	cis	lung	GTEx
rs3088174	RP11-797H7.5	cis	Thyroid	GTEx
rs3088174	INTS4L1	cis	Adipose Subcutaneous	GTEx
rs3088174	RP11-460N20.5	cis	Adipose Subcutaneous	GTEx
rs3088174	CCT6P3	cis	Esophagus Mucosa	GTEx
rs3088174	RP11-797H7.5	cis	Adipose Subcutaneous	GTEx
rs3088174	RP11-460N20.5	cis	Whole Blood	GTEx
rs3088174	RP11-797H7.3	cis	Thyroid	GTEx
rs3088174	RP11-797H7.5	cis	lung	GTEx
rs3088174	CCT6P3	cis	lung	GTEx
rs3088174	ERV3-1	cis	Artery Aorta	GTEx
rs3088174	INTS4L1	cis	Esophagus Muscularis	GTEx
rs3088174	RP11-460N20.5	cis	Artery Aorta	GTEx
rs3088174	RP11-667F9.1	cis	Adipose Subcutaneous	GTEx
rs3088174	CCT6P3	cis	Nerve Tibial	GTEx
rs3088174	RP11-797H7.3	cis	Artery Tibial	GTEx
rs3088174	INTS4L1	cis	Nerve Tibial	GTEx
rs3088174	RP11-460N20.4	cis	Esophagus Muscularis	GTEx
rs3088174	ERV3	cis	multi-tissue	Pritchard
rs3088174	RP11-460N20.5	cis	Artery Tibial	GTEx
rs3088174	RP11-667F9.1	cis	Nerve Tibial	GTEx
rs3088174	RP11-460N20.5	cis	lung	GTEx
rs3088174	AC104057.1	cis	Adipose Subcutaneous	GTEx
rs3088174	RP11-460N20.5	cis	Thyroid	GTEx
rs3088174	RP11-797H7.3	cis	Adipose Subcutaneous	GTEx
rs3088174	RP11-460N20.5	cis	Nerve Tibial	GTEx
rs3088174	RP11-797H7.3	cis	Nerve Tibial	GTEx
rs3088174	CCT6P3	cis	Skin Sun Exposed Lower leg	GTEx
rs3088174	RP11-460N20.5	cis	Esophagus Mucosa	GTEx
rs3088174	RP11-460N20.4	cis	lung	GTEx

Chromatin state (count:64 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:64433400-64465600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr7:64436400-64454200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr7:64436800-64454200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
4	chr7:64438600-64465200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr7:64438800-64454400	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr7:64440200-64457600	Weak transcription	Pancreas	Pancrea
7	chr7:64440600-64452000	Weak transcription	Rectal Smooth Muscle	rectum
8	chr7:64441800-64453200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr7:64441800-64456800	Weak transcription	Fetal Heart	heart
10	chr7:64441800-64459400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr7:64441800-64465000	Weak transcription	Brain Angular Gyrus	brain
12	chr7:64442000-64452800	Weak transcription	Stomach Smooth Muscle	stomach
13	chr7:64442000-64453600	Weak transcription	Fetal Kidney	kidney
14	chr7:64442000-64457600	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr7:64442600-64453200	Weak transcription	Placenta Amnion	Placenta Amnion
16	chr7:64442600-64453600	Weak transcription	Muscle Satellite Cultured Cells	--
17	chr7:64443000-64452200	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr7:64443800-64457200	Weak transcription	Right Ventricle	heart
19	chr7:64444200-64454200	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
20	chr7:64444800-64452400	Weak transcription	Ovary	ovary
21	chr7:64445400-64452000	Weak transcription	Esophagus	oesophagus
22	chr7:64446000-64460000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
23	chr7:64446400-64452200	Weak transcription	Left Ventricle	heart
24	chr7:64447600-64453000	Weak transcription	HSMM	muscle
25	chr7:64448800-64454200	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
26	chr7:64448800-64461200	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
27	chr7:64449000-64465200	ZNF genes & repeats	Fetal Brain Female	brain
28	chr7:64449200-64451800	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr7:64449200-64454400	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr7:64450000-64464000	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
31	chr7:64450200-64452000	ZNF genes & repeats	HepG2	liver
32	chr7:64450200-64452200	ZNF genes & repeats	Fetal Intestine Large	intestine
33	chr7:64450200-64453800	ZNF genes & repeats	Aorta	Aorta
34	chr7:64450200-64454000	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
35	chr7:64450200-64454200	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
36	chr7:64450200-64460000	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
37	chr7:64450200-64460000	ZNF genes & repeats	Primary B cells from cord blood	blood
38	chr7:64450200-64460000	ZNF genes & repeats	Fetal Intestine Small	intestine
39	chr7:64450200-64462400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
40	chr7:64450200-64462400	Genic enhancers	Fetal Adrenal Gland	Adrenal Gland
41	chr7:64450200-64462600	ZNF genes & repeats	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr7:64450200-64465400	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
43	chr7:64450400-64452000	Strong transcription	HSMMtube	muscle
44	chr7:64450400-64453800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr7:64450400-64453800	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
46	chr7:64450400-64454000	ZNF genes & repeats	Liver	Liver
47	chr7:64450400-64455400	ZNF genes & repeats	Primary T cells from cord blood	blood
48	chr7:64450400-64460000	ZNF genes & repeats	Placenta	Placenta
49	chr7:64450400-64460200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
50	chr7:64450400-64464000	ZNF genes & repeats	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links