Variant report

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs1659231	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs3106919	0.87[ASN][1000 genomes]
rs3106921	0.87[ASN][1000 genomes]
rs3113461	0.90[ASN][1000 genomes]
rs3113462	0.86[ASN][1000 genomes]
rs4311287	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs479939	0.84[ASN][1000 genomes]
rs4835157	0.87[ASN][1000 genomes]
rs485135	0.81[ASN][1000 genomes]
rs487115	0.87[ASN][1000 genomes]
rs487274	0.87[ASN][1000 genomes]
rs497432	0.90[ASN][1000 genomes]
rs500134	0.90[ASN][1000 genomes]
rs500537	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs502591	0.87[ASN][1000 genomes]
rs503727	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs506969	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs507986	0.87[ASN][1000 genomes]
rs509589	0.90[ASN][1000 genomes]
rs514767	0.87[ASN][1000 genomes]
rs518649	0.84[ASN][1000 genomes]
rs518652	0.84[ASN][1000 genomes]
rs526478	0.90[ASN][1000 genomes]
rs538844	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs541594	0.80[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs546978	0.84[ASN][1000 genomes]
rs547896	0.90[ASN][1000 genomes]
rs555589	0.84[ASN][1000 genomes]
rs570928	0.84[ASN][1000 genomes]
rs576403	0.90[ASN][1000 genomes]
rs968903	0.80[AMR][1000 genomes];0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv880249	chr4:150156579-150280221	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1016977	chr4:150173255-150605595	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv537298	chr4:150173255-150605595	Weak transcription Enhancers Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:150212200-150214600	Enhancers	Fetal Heart	heart
2	chr4:150212400-150215200	Enhancers	Fetal Stomach	stomach
3	chr4:150212800-150214200	Enhancers	Rectal Smooth Muscle	rectum
4	chr4:150213000-150213600	Weak transcription	Adipose Nuclei	Adipose
5	chr4:150213000-150213800	Weak transcription	Fetal Muscle Leg	muscle
6	chr4:150213200-150213600	Weak transcription	Muscle Satellite Cultured Cells	--
7	chr4:150213200-150213600	Weak transcription	Colon Smooth Muscle	Colon
8	chr4:150213200-150213600	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr4:150213200-150213600	Weak transcription	Fetal Lung	lung
10	chr4:150213400-150214400	Weak transcription	Psoas Muscle	Psoas

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