The 2.0 version of rSNPBase

Variant report

Variant rs3171490
Chromosome Location chr21:46520453-46520454
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:46499000-46522200 Weak transcription NHDF-Ad bronchial
2 chr21:46500000-46522200 Weak transcription H9 Cell Line embryonic stem cell
3 chr21:46503000-46522200 Weak transcription Brain Angular Gyrus brain
4 chr21:46506600-46521400 Weak transcription NHEK skin
5 chr21:46509400-46524000 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr21:46512000-46521600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
7 chr21:46512200-46521800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr21:46512200-46522400 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr21:46512200-46525600 Weak transcription Brain Inferior Temporal Lobe brain
10 chr21:46513200-46529200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr21:46513400-46521600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr21:46513600-46520800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr21:46513600-46522200 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr21:46513600-46522400 Weak transcription Brain Hippocampus Middle brain
15 chr21:46513600-46522600 Weak transcription Aorta Aorta
16 chr21:46513600-46522600 Weak transcription Brain Anterior Caudate brain
17 chr21:46513800-46522000 Weak transcription Stomach Mucosa stomach
18 chr21:46514200-46525000 Enhancers Right Ventricle heart
19 chr21:46514600-46522600 Weak transcription Fetal Thymus thymus
20 chr21:46514800-46522200 Weak transcription Primary T cells from cord blood blood
21 chr21:46514800-46523800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr21:46515000-46522200 Weak transcription Rectal Smooth Muscle rectum
23 chr21:46515200-46521800 Weak transcription Pancreas Pancrea
24 chr21:46515200-46522000 Weak transcription Primary T helper naive cells fromperipheralblood blood
25 chr21:46515400-46522000 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr21:46515600-46522400 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr21:46516200-46522200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr21:46516200-46524000 Weak transcription Gastric stomach
29 chr21:46516400-46521600 Weak transcription HMEC breast
30 chr21:46516400-46525600 Weak transcription K562 blood
31 chr21:46516400-46549400 Weak transcription Placenta Amnion Placenta Amnion
32 chr21:46516600-46520800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr21:46516600-46521600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr21:46516600-46522000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr21:46516600-46522600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr21:46516600-46522600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr21:46517400-46523800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
38 chr21:46517600-46521400 Weak transcription Adipose Nuclei Adipose
39 chr21:46517600-46521400 Enhancers Fetal Brain Male brain
40 chr21:46518000-46520800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr21:46518200-46522600 Weak transcription Esophagus oesophagus
42 chr21:46518400-46520600 Enhancers Muscle Satellite Cultured Cells --
43 chr21:46518600-46523600 Weak transcription Placenta Placenta
44 chr21:46518800-46521200 Weak transcription Hela-S3 cervix
45 chr21:46519000-46522200 Weak transcription Primary T helper naive cells from peripheral blood blood
46 chr21:46519200-46520600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr21:46519200-46520800 Weak transcription Colonic Mucosa Colon
48 chr21:46519200-46521600 Weak transcription Primary B cells from peripheral blood blood
49 chr21:46519200-46521600 Weak transcription HSMM muscle
50 chr21:46519200-46521800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015