Variant report

Variant rs3176790
Chromosome Location chr12:9912439-9912440
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:9903400-9917600 Weak transcription H1 Cell Line embryonic stem cell
2 chr12:9904400-9913200 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr12:9904600-9913400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
4 chr12:9905600-9913400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
5 chr12:9909000-9914800 Active TSS Thymus Thymus
6 chr12:9909600-9913400 Active TSS Fetal Thymus thymus
7 chr12:9909600-9914200 Active TSS Primary T killer memory cells from peripheral blood blood
8 chr12:9909800-9914000 Active TSS K562 blood
9 chr12:9909800-9914400 Active TSS Primary T cells fromperipheralblood blood
10 chr12:9910200-9914200 Active TSS Rectal Mucosa Donor 29 rectum
11 chr12:9910400-9913600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
12 chr12:9910400-9914000 Active TSS Primary T killer naive cells fromperipheralblood blood
13 chr12:9910400-9914400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
14 chr12:9910400-9914400 Active TSS Primary T helper naive cells from peripheral blood blood
15 chr12:9910600-9912800 Active TSS Dnd41 blood
16 chr12:9910600-9913600 Active TSS Primary hematopoietic stem cells short term culture blood
17 chr12:9910600-9913600 Active TSS Primary T regulatory cells fromperipheralblood blood
18 chr12:9910600-9914400 Active TSS Primary T cells from cord blood blood
19 chr12:9910600-9914400 Active TSS Primary Natural Killer cells fromperipheralblood blood
20 chr12:9910800-9913400 Active TSS Sigmoid Colon Sigmoid Colon
21 chr12:9911000-9913800 Active TSS Rectal Mucosa Donor 31 rectum
22 chr12:9911000-9914000 Active TSS Duodenum Mucosa Duodenum
23 chr12:9911200-9913000 Active TSS Small Intestine intestine
24 chr12:9911200-9913600 Active TSS Primary T helper cells fromperipheralblood blood
25 chr12:9911200-9913600 Active TSS Rectal Smooth Muscle rectum
26 chr12:9911200-9913600 Active TSS GM12878-XiMat blood
27 chr12:9911400-9913400 Active TSS Primary B cells from cord blood blood
28 chr12:9911400-9913600 Active TSS Primary B cells from peripheral blood blood
29 chr12:9911400-9913600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr12:9911400-9913600 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr12:9911600-9913400 Active TSS Primary hematopoietic stem cells blood
32 chr12:9911600-9913400 Weak transcription Placenta Placenta
33 chr12:9911800-9913000 Bivalent/Poised TSS Liver Liver
34 chr12:9912000-9912600 Enhancers Primary monocytes fromperipheralblood blood
35 chr12:9912000-9912800 Weak transcription Adipose Nuclei Adipose
36 chr12:9912000-9914200 Enhancers Primary neutrophils fromperipheralblood blood
37 chr12:9912200-9912600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr12:9912200-9912800 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 1 blood
39 chr12:9912200-9913200 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
40 chr12:9912200-9913200 Active TSS Fetal Stomach stomach
41 chr12:9912400-9912600 Active TSS Primary mononuclear cells fromperipheralblood Blood
42 chr12:9912400-9913000 Active TSS Duodenum Smooth Muscle Duodenum

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