Variant report

Variant rs3211607
Chromosome Location chr12:58146776-58146777
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:58145000-58146800 Active TSS Pancreatic Islets Pancreatic Islet
2 chr12:58145200-58146800 Active TSS H9 Cell Line embryonic stem cell
3 chr12:58145200-58146800 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
4 chr12:58145200-58146800 Active TSS HSMMtube muscle
5 chr12:58145400-58146800 Flanking Active TSS Primary B cells from cord blood blood
6 chr12:58145400-58146800 Active TSS Ovary ovary
7 chr12:58145400-58146800 Active TSS Psoas Muscle Psoas
8 chr12:58145400-58146800 Active TSS Right Atrium heart
9 chr12:58145600-58146800 Active TSS Brain Substantia Nigra brain
10 chr12:58145600-58146800 Active TSS Right Ventricle heart
11 chr12:58145800-58146800 Active TSS Colonic Mucosa Colon
12 chr12:58146000-58146800 Active TSS Fetal Muscle Trunk muscle
13 chr12:58146200-58146800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr12:58146200-58147000 Enhancers Primary Natural Killer cells fromperipheralblood blood
15 chr12:58146200-58147800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
16 chr12:58146200-58148000 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr12:58146200-58148000 Weak transcription Sigmoid Colon Sigmoid Colon
18 chr12:58146200-58148200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr12:58146200-58148200 Weak transcription Lung lung
20 chr12:58146200-58148400 Weak transcription Small Intestine intestine
21 chr12:58146200-58148600 Weak transcription Aorta Aorta
22 chr12:58146400-58146800 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
23 chr12:58146400-58146800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr12:58146400-58146800 Flanking Active TSS Primary monocytes fromperipheralblood blood
25 chr12:58146400-58146800 Flanking Active TSS Primary T cells from cord blood blood
26 chr12:58146400-58146800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
27 chr12:58146400-58146800 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
28 chr12:58146400-58146800 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
29 chr12:58146400-58146800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
30 chr12:58146400-58146800 Flanking Active TSS Muscle Satellite Cultured Cells --
31 chr12:58146400-58146800 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr12:58146400-58146800 Flanking Active TSS Adipose Nuclei Adipose
33 chr12:58146400-58146800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
34 chr12:58146400-58146800 Flanking Active TSS Colon Smooth Muscle Colon
35 chr12:58146400-58146800 Flanking Active TSS Duodenum Mucosa Duodenum
36 chr12:58146400-58146800 Flanking Active TSS Fetal Intestine Large intestine
37 chr12:58146400-58146800 Flanking Active TSS Fetal Muscle Leg muscle
38 chr12:58146400-58146800 Flanking Active TSS Placenta Placenta
39 chr12:58146400-58146800 Flanking Active TSS Fetal Stomach stomach
40 chr12:58146400-58146800 Flanking Active TSS Fetal Thymus thymus
41 chr12:58146400-58146800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
42 chr12:58146400-58146800 Flanking Active TSS Rectal Mucosa Donor 31 rectum
43 chr12:58146400-58146800 Flanking Active TSS Skeletal Muscle Female skeletal muscle
44 chr12:58146400-58146800 Flanking Active TSS Thymus Thymus
45 chr12:58146400-58146800 Flanking Active TSS Hela-S3 cervix
46 chr12:58146400-58146800 Flanking Active TSS HepG2 liver
47 chr12:58146400-58146800 Flanking Active TSS HMEC breast
48 chr12:58146400-58146800 Flanking Active TSS HUVEC blood vessel
49 chr12:58146400-58146800 Flanking Active TSS NHDF-Ad bronchial
50 chr12:58146400-58146800 Flanking Active TSS NHLF lung

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