Variant report
| Variant | rs3213125 |
|---|---|
| Chromosome Location | chr12:56366581-56366582 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:56361200-56366800 | Weak transcription | Aorta | Aorta |
| 2 | chr12:56361200-56367200 | Transcr. at gene 5' and 3' | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 3 | chr12:56361400-56366600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 4 | chr12:56361400-56366600 | Weak transcription | Brain Anterior Caudate | brain |
| 5 | chr12:56361400-56366600 | Weak transcription | Left Ventricle | heart |
| 6 | chr12:56361400-56366600 | Weak transcription | Psoas Muscle | Psoas |
| 7 | chr12:56361400-56366800 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 8 | chr12:56361600-56366600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 9 | chr12:56361800-56366600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 10 | chr12:56361800-56366600 | Weak transcription | Brain Substantia Nigra | brain |
| 11 | chr12:56361800-56366600 | Weak transcription | Esophagus | oesophagus |
| 12 | chr12:56361800-56366600 | Weak transcription | Pancreas | Pancrea |
| 13 | chr12:56361800-56366600 | Weak transcription | Spleen | Spleen |
| 14 | chr12:56362000-56366600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 15 | chr12:56362000-56366800 | Weak transcription | Gastric | stomach |
| 16 | chr12:56362200-56366600 | Weak transcription | Fetal Kidney | kidney |
| 17 | chr12:56362200-56366800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 18 | chr12:56362400-56366600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 19 | chr12:56363800-56366600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 20 | chr12:56364400-56366600 | Genic enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
| 21 | chr12:56365000-56366600 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 22 | chr12:56365200-56366800 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 23 | chr12:56365400-56366600 | Enhancers | Fetal Heart | heart |
| 24 | chr12:56365600-56366600 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 25 | chr12:56365600-56366600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 26 | chr12:56365600-56366600 | Weak transcription | Lung | lung |
| 27 | chr12:56365600-56366600 | Weak transcription | Ovary | ovary |
| 28 | chr12:56365600-56366600 | Enhancers | Placenta Amnion | Placenta Amnion |
| 29 | chr12:56365600-56366600 | Enhancers | HepG2 | liver |
| 30 | chr12:56365600-56366600 | Enhancers | HSMM | muscle |
| 31 | chr12:56365600-56366800 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 32 | chr12:56365600-56366800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr12:56365600-56366800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 34 | chr12:56365600-56367000 | Flanking Active TSS | Hela-S3 | cervix |
| 35 | chr12:56365600-56369000 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
| 36 | chr12:56365800-56366600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 37 | chr12:56365800-56366600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 38 | chr12:56365800-56366600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 39 | chr12:56365800-56366600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 40 | chr12:56365800-56366600 | Enhancers | Primary T cells fromperipheralblood | blood |
| 41 | chr12:56365800-56366600 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 42 | chr12:56365800-56366600 | Enhancers | Colon Smooth Muscle | Colon |
| 43 | chr12:56365800-56366600 | Enhancers | Fetal Lung | lung |
| 44 | chr12:56366000-56366600 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
| 45 | chr12:56366000-56366600 | Enhancers | Primary monocytes fromperipheralblood | blood |
| 46 | chr12:56366000-56366600 | Enhancers | Primary hematopoietic stem cells | blood |
| 47 | chr12:56366000-56366600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 48 | chr12:56366000-56366600 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
| 49 | chr12:56366000-56366600 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 50 | chr12:56366000-56366600 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
