The 2.0 version of rSNPBase

Variant report

Variant rs3219041
Chromosome Location chr1:226577764-226577765
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:226543000-226578400 Strong transcription Breast Myoepithelial Primary Cells Breast
2 chr1:226543000-226582800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:226543000-226590800 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr1:226543000-226590800 Strong transcription Monocytes-CD14+_RO01746 blood
5 chr1:226543000-226591400 Strong transcription Primary T cells from cord blood blood
6 chr1:226543200-226588600 Strong transcription HUES6 Cell Line embryonic stem cell
7 chr1:226543200-226588600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:226543400-226580400 Strong transcription H1 Cell Line embryonic stem cell
9 chr1:226543400-226590200 Strong transcription iPS-20b Cell Line embryonic stem cell
10 chr1:226543400-226591400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:226543600-226590400 Strong transcription Primary T helper cells fromperipheralblood blood
12 chr1:226543600-226591400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:226544200-226590400 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr1:226544600-226580200 Strong transcription Stomach Smooth Muscle stomach
15 chr1:226544600-226580400 Strong transcription Fetal Stomach stomach
16 chr1:226544600-226591800 Strong transcription Dnd41 blood
17 chr1:226544800-226590800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr1:226545000-226580400 Strong transcription Sigmoid Colon Sigmoid Colon
19 chr1:226545000-226590800 Strong transcription Primary monocytes fromperipheralblood blood
20 chr1:226545200-226580200 Strong transcription Ovary ovary
21 chr1:226545200-226580400 Strong transcription Fetal Intestine Large intestine
22 chr1:226545200-226581000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:226545200-226581200 Strong transcription Adipose Nuclei Adipose
24 chr1:226545200-226582600 Strong transcription Rectal Mucosa Donor 29 rectum
25 chr1:226545200-226582800 Strong transcription Duodenum Mucosa Duodenum
26 chr1:226545400-226580000 Strong transcription HUES64 Cell Line embryonic stem cell
27 chr1:226545400-226580200 Strong transcription Thymus Thymus
28 chr1:226545400-226580400 Strong transcription H9 Cell Line embryonic stem cell
29 chr1:226545400-226580400 Strong transcription Cortex derived primary cultured neurospheres brain
30 chr1:226545400-226580400 Strong transcription Rectal Smooth Muscle rectum
31 chr1:226545400-226581400 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr1:226545400-226584000 Strong transcription iPS-18 Cell Line embryonic stem cell
33 chr1:226545400-226590600 Strong transcription HUES48 Cell Line embryonic stem cell
34 chr1:226545600-226580200 Strong transcription Esophagus oesophagus
35 chr1:226545600-226581400 Strong transcription Primary T helper naive cells from peripheral blood blood
36 chr1:226545600-226582800 Strong transcription Fetal Thymus thymus
37 chr1:226545600-226588200 Strong transcription Primary T cells fromperipheralblood blood
38 chr1:226545800-226579800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:226545800-226579800 Strong transcription Primary neutrophils fromperipheralblood blood
40 chr1:226545800-226580200 Strong transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:226545800-226580200 Strong transcription Pancreas Pancrea
42 chr1:226545800-226581800 Strong transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:226545800-226582600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
44 chr1:226546000-226578200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr1:226546000-226578400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:226546000-226579800 Strong transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:226546000-226580000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:226546000-226580600 Strong transcription Fetal Brain Female brain
49 chr1:226546000-226582600 Strong transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:226546200-226590600 Strong transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015