Variant report

Variant	rs3219760
Chromosome Location	chr8:20367280-20367281
allele	(CA)29/31/32/33/34
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033511	chr8:19751299-20625091	Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv530877	chr8:19873053-20593254	Genic enhancers Weak transcription Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	esv2758152	chr8:20228949-20514807	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	esv2759603	chr8:20228949-20514807	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv469890	chr8:20239114-20445136	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv482881	chr8:20239114-20445136	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv916454	chr8:20342959-20531705	Flanking Active TSS Enhancers Weak transcription Bivalent Enhancer ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
8	esv3364177	chr8:20367047-20367313	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:20363800-20367600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr8:20365600-20367600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr8:20365800-20367600	Enhancers	H9 Cell Line	embryonic stem cell
4	chr8:20366200-20367400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr8:20366400-20367400	Enhancers	HUES6 Cell Line	embryonic stem cell
6	chr8:20366400-20367600	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
7	chr8:20366400-20367800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
8	chr8:20366400-20368000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr8:20366600-20367600	Bivalent Enhancer	iPS-20b Cell Line	embryonic stem cell
10	chr8:20366600-20367800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
11	chr8:20366600-20367800	Enhancers	Primary hematopoietic stem cells	blood
12	chr8:20366800-20367400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
13	chr8:20366800-20367800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
14	chr8:20366800-20368000	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
15	chr8:20367000-20367800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr8:20367200-20367600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr8:20367200-20368000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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