Variant report

Variant rs324419
Chromosome Location chr1:46871986-46871987
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:46861000-46874400 Weak transcription Primary T cells from cord blood blood
2 chr1:46861200-46872200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr1:46861200-46879000 Weak transcription Aorta Aorta
4 chr1:46861200-46879400 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:46861600-46880400 Weak transcription Primary T helper naive cells fromperipheralblood blood
6 chr1:46864000-46872400 Enhancers Primary monocytes fromperipheralblood blood
7 chr1:46865400-46876000 Weak transcription Primary hematopoietic stem cells blood
8 chr1:46866200-46872000 Weak transcription Primary B cells from peripheral blood blood
9 chr1:46866400-46872600 Weak transcription H9 Cell Line embryonic stem cell
10 chr1:46867800-46872400 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr1:46867800-46872600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr1:46867800-46872600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:46867800-46872600 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr1:46867800-46877000 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:46868000-46872000 Weak transcription Colon Smooth Muscle Colon
16 chr1:46868000-46876200 Weak transcription Small Intestine intestine
17 chr1:46868000-46884200 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:46868200-46872000 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr1:46868200-46872000 Weak transcription Fetal Brain Female brain
20 chr1:46868200-46872000 Weak transcription Left Ventricle heart
21 chr1:46868200-46872200 Weak transcription Cortex derived primary cultured neurospheres brain
22 chr1:46868200-46873200 Weak transcription Fetal Intestine Large intestine
23 chr1:46868200-46873600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr1:46868200-46875000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr1:46868200-46883800 Weak transcription HepG2 liver
26 chr1:46868400-46872800 Weak transcription NHEK skin
27 chr1:46869000-46872200 Strong transcription Thymus Thymus
28 chr1:46869000-46882000 Strong transcription Fetal Intestine Small intestine
29 chr1:46870200-46872600 Genic enhancers Colonic Mucosa Colon
30 chr1:46870200-46874000 Enhancers K562 blood
31 chr1:46870400-46873200 Genic enhancers Brain Cingulate Gyrus brain
32 chr1:46870600-46872000 Weak transcription Rectal Mucosa Donor 29 rectum
33 chr1:46870600-46872600 Enhancers Brain Hippocampus Middle brain
34 chr1:46870800-46872200 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:46871000-46872000 Weak transcription Brain Germinal Matrix brain
36 chr1:46871000-46872800 Weak transcription Liver Liver
37 chr1:46871000-46873000 Enhancers Brain Substantia Nigra brain
38 chr1:46871000-46873600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr1:46871200-46872200 Enhancers Duodenum Mucosa Duodenum
40 chr1:46871400-46872200 Enhancers Duodenum Smooth Muscle Duodenum
41 chr1:46871400-46872200 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr1:46871400-46872400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
43 chr1:46871400-46873400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr1:46871600-46872000 Enhancers Fetal Muscle Trunk muscle
45 chr1:46871600-46872200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr1:46871600-46872200 Genic enhancers Gastric stomach
47 chr1:46871600-46872200 Enhancers Ovary ovary
48 chr1:46871600-46872400 Enhancers Breast Myoepithelial Primary Cells Breast
49 chr1:46871600-46872800 Enhancers Right Ventricle heart
50 chr1:46871600-46872800 Enhancers Spleen Spleen

Quick Search:


  
Input of quick search could be:

what's new

Quick links