Variant report

Variant	rs327508
Chromosome Location	chr7:127263478-127263479
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs12531847	1.00[ASN][1000 genomes]
rs12540357	1.00[ASN][1000 genomes]
rs12706816	1.00[ASN][1000 genomes]
rs12706818	1.00[ASN][1000 genomes]
rs12706820	1.00[ASN][1000 genomes]
rs12706821	1.00[ASN][1000 genomes]
rs13221709	1.00[ASN][1000 genomes]
rs13229973	1.00[ASN][1000 genomes]
rs13231367	1.00[ASN][1000 genomes]
rs13236338	1.00[ASN][1000 genomes]
rs13238924	1.00[ASN][1000 genomes]
rs1348103	1.00[ASN][1000 genomes]
rs1419970	1.00[ASN][1000 genomes]
rs17151466	1.00[ASN][1000 genomes]
rs34026100	1.00[ASN][1000 genomes]
rs34839191	1.00[ASN][1000 genomes]
rs35154268	1.00[ASN][1000 genomes]
rs35660964	1.00[ASN][1000 genomes]
rs58406876	1.00[ASN][1000 genomes]
rs67632185	1.00[ASN][1000 genomes]
rs67827668	1.00[ASN][1000 genomes]
rs6959487	1.00[ASN][1000 genomes]
rs73234874	1.00[ASN][1000 genomes]
rs7810024	1.00[ASN][1000 genomes]
rs894062	1.00[ASN][1000 genomes]
rs9649027	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831122	chr7:127143207-127357885	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
2	nsv1022385	chr7:127246656-127971194	Weak transcription Bivalent Enhancer Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
3	nsv539120	chr7:127246656-127971194	Enhancers Weak transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	37 gene(s)	inside rSNPs	diseases
4	nsv1016143	chr7:127251359-127726762	Strong transcription Enhancers Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	27 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127261000-127269600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr7:127261400-127267200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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