Variant report

Variant	rs32769
Chromosome Location	chr5:35372609-35372610
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs165946	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs244778	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs244780	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs244781	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs32772	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs32773	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs400888	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs401419	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs423851	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs428351	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35370400-35374400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:35370400-35375600	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr5:35370600-35375600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr5:35371200-35373000	Enhancers	Rectal Mucosa Donor 29	rectum
5	chr5:35371200-35374400	Enhancers	Placenta Amnion	Placenta Amnion
6	chr5:35371400-35374400	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr5:35371800-35374400	Enhancers	Placenta	Placenta
8	chr5:35372000-35373000	Enhancers	Fetal Intestine Small	intestine
9	chr5:35372200-35372800	Enhancers	Breast Myoepithelial Primary Cells	Breast
10	chr5:35372200-35373400	Weak transcription	Fetal Intestine Large	intestine
11	chr5:35372400-35374000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr5:35372400-35374000	Weak transcription	Pancreas	Pancrea
13	chr5:35372400-35377200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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