Variant report

Variant	rs32770
Chromosome Location	chr5:35373152-35373153
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs17438884	0.96[EUR][1000 genomes]
rs244779	0.81[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs28580	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs32767	0.89[ASN][1000 genomes]
rs32768	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs32771	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs32774	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs32775	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs32776	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs32777	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs32780	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs32781	0.86[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs32782	0.88[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs32783	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs32784	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs32786	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs32787	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs390469	0.85[ASN][1000 genomes]
rs391024	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs391090	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs391582	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs393791	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs401590	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs413206	0.85[ASN][1000 genomes]
rs513413	0.89[AFR][1000 genomes];0.89[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35370400-35374400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr5:35370400-35375600	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr5:35370600-35375600	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr5:35371200-35374400	Enhancers	Placenta Amnion	Placenta Amnion
5	chr5:35371400-35374400	Enhancers	Rectal Mucosa Donor 31	rectum
6	chr5:35371800-35374400	Enhancers	Placenta	Placenta
7	chr5:35372200-35373400	Weak transcription	Fetal Intestine Large	intestine
8	chr5:35372400-35374000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr5:35372400-35374000	Weak transcription	Pancreas	Pancrea
10	chr5:35372400-35377200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr5:35373000-35373800	Weak transcription	Fetal Intestine Small	intestine
12	chr5:35373000-35374000	Weak transcription	Rectal Mucosa Donor 29	rectum

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