Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1671884	0.80[EUR][1000 genomes]
rs1708146	0.80[EUR][1000 genomes]
rs298416	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs33103	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs33104	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs62252313	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs637382	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs696492	0.83[EUR][1000 genomes]
rs696501	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs696502	0.80[EUR][1000 genomes]
rs696503	0.82[EUR][1000 genomes]
rs696504	0.83[EUR][1000 genomes]
rs696508	0.82[EUR][1000 genomes]
rs696509	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs698224	0.81[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs698228	0.83[EUR][1000 genomes]
rs711698	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs711699	0.83[EUR][1000 genomes]
rs822754	0.82[EUR][1000 genomes]
rs822756	0.80[EUR][1000 genomes]
rs822757	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014828	chr3:22554271-23033498	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv1008306	chr3:22762892-23026548	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:22927000-22927800	Enhancers	Skeletal Muscle Female	skeletal muscle
2	chr3:22927000-22928400	Enhancers	Ovary	ovary

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