Variant report
| Variant | rs338224 |
|---|---|
| Chromosome Location | chr1:58946947-58946948 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr1:58918400-58974000 | Weak transcription | Spleen | Spleen |
| 2 | chr1:58923200-58954200 | Weak transcription | Pancreas | Pancrea |
| 3 | chr1:58929000-58954600 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 4 | chr1:58930400-58949400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 5 | chr1:58931000-58954200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 6 | chr1:58931000-58954600 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr1:58931000-58954800 | Weak transcription | Gastric | stomach |
| 8 | chr1:58931000-58977000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr1:58931200-58952600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 10 | chr1:58931200-58969400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 11 | chr1:58931200-59010800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 12 | chr1:58931600-58974000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 13 | chr1:58932400-58947400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 14 | chr1:58932600-58947400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 15 | chr1:58932600-58947600 | Weak transcription | Dnd41 | blood |
| 16 | chr1:58932600-58948400 | Weak transcription | Fetal Stomach | stomach |
| 17 | chr1:58932600-58954600 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr1:58932600-58974200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 19 | chr1:58932600-58977000 | Weak transcription | HSMMtube | muscle |
| 20 | chr1:58932800-58954000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 21 | chr1:58932800-58954200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 22 | chr1:58932800-58968000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 23 | chr1:58933000-58954200 | Weak transcription | Fetal Intestine Small | intestine |
| 24 | chr1:58933000-58954400 | Weak transcription | Duodenum Mucosa | Duodenum |
| 25 | chr1:58933400-58948000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 26 | chr1:58933400-58948800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 27 | chr1:58933800-58984800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 28 | chr1:58934600-58948800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 29 | chr1:58934600-58954600 | Weak transcription | Esophagus | oesophagus |
| 30 | chr1:58934600-58954600 | Weak transcription | Lung | lung |
| 31 | chr1:58934600-58968000 | Weak transcription | Brain Hippocampus Middle | brain |
| 32 | chr1:58934600-58974000 | Weak transcription | Right Ventricle | heart |
| 33 | chr1:58934800-58948800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 34 | chr1:58934800-58954200 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 35 | chr1:58934800-58954800 | Weak transcription | Fetal Muscle Leg | muscle |
| 36 | chr1:58934800-58967200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 37 | chr1:58934800-58969200 | Weak transcription | Liver | Liver |
| 38 | chr1:58934800-58976600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 39 | chr1:58934800-58994000 | Weak transcription | HSMM | muscle |
| 40 | chr1:58935000-58974000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 41 | chr1:58936600-58948800 | Weak transcription | Left Ventricle | heart |
| 42 | chr1:58942000-58969200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 43 | chr1:58942000-58974200 | Weak transcription | Brain Substantia Nigra | brain |
| 44 | chr1:58942200-58948400 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 45 | chr1:58942200-58974200 | Weak transcription | Fetal Thymus | thymus |
| 46 | chr1:58942400-58954600 | Weak transcription | Thymus | Thymus |
| 47 | chr1:58943200-58949800 | Strong transcription | Primary B cells from cord blood | blood |
| 48 | chr1:58944400-58947600 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
| 49 | chr1:58944400-58967800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 50 | chr1:58944600-58976000 | Weak transcription | Muscle Satellite Cultured Cells | -- |
