The 2.0 version of rSNPBase

Variant report

Variant rs33922489
Chromosome Location chr20:16342979-16342980
allele -/A
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:16262600-16346200 Weak transcription Gastric stomach
2 chr20:16276400-16348200 Weak transcription Colon Smooth Muscle Colon
3 chr20:16289400-16348000 Weak transcription Colonic Mucosa Colon
4 chr20:16295600-16349000 Weak transcription HepG2 liver
5 chr20:16296600-16345200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr20:16315400-16345000 Weak transcription Duodenum Mucosa Duodenum
7 chr20:16315400-16346200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
8 chr20:16315400-16348000 Weak transcription Fetal Intestine Large intestine
9 chr20:16315400-16364400 Weak transcription Rectal Smooth Muscle rectum
10 chr20:16315600-16346200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr20:16315600-16348000 Weak transcription Primary B cells from peripheral blood blood
12 chr20:16315600-16348400 Weak transcription Spleen Spleen
13 chr20:16315800-16357600 Weak transcription Right Ventricle heart
14 chr20:16316000-16344000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr20:16316000-16346200 Weak transcription Primary hematopoietic stem cells blood
16 chr20:16316000-16384400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr20:16316200-16347200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr20:16318600-16346200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr20:16318600-16348400 Weak transcription Esophagus oesophagus
20 chr20:16318800-16345000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr20:16318800-16368200 Weak transcription Primary B cells from cord blood blood
22 chr20:16319000-16345800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr20:16319000-16346200 Weak transcription Pancreas Pancrea
24 chr20:16319000-16346400 Weak transcription Fetal Intestine Small intestine
25 chr20:16322600-16346000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr20:16326200-16346000 Weak transcription Liver Liver
27 chr20:16327200-16344000 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr20:16327400-16346400 Weak transcription Stomach Smooth Muscle stomach
29 chr20:16327600-16348200 Weak transcription Left Ventricle heart
30 chr20:16329200-16345200 Weak transcription Rectal Mucosa Donor 29 rectum
31 chr20:16330000-16344800 Weak transcription Rectal Mucosa Donor 31 rectum
32 chr20:16330000-16346200 Weak transcription Lung lung
33 chr20:16331400-16348600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr20:16332400-16343800 Weak transcription Brain Angular Gyrus brain
35 chr20:16332400-16344600 Weak transcription Brain Inferior Temporal Lobe brain
36 chr20:16332400-16346200 Weak transcription Muscle Satellite Cultured Cells --
37 chr20:16332400-16347200 Weak transcription Brain Anterior Caudate brain
38 chr20:16332400-16348200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr20:16332600-16343600 Weak transcription Brain Cingulate Gyrus brain
40 chr20:16332800-16343600 Weak transcription Brain Hippocampus Middle brain
41 chr20:16332800-16344000 Weak transcription Brain Substantia Nigra brain
42 chr20:16333400-16347200 Weak transcription Skeletal Muscle Male skeletal muscle
43 chr20:16333600-16347200 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr20:16333600-16348000 Weak transcription Fetal Muscle Trunk muscle
45 chr20:16333600-16348200 Weak transcription Psoas Muscle Psoas
46 chr20:16334000-16377400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr20:16334400-16344200 Weak transcription Aorta Aorta
48 chr20:16334600-16346600 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr20:16335600-16348600 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr20:16337000-16344000 Weak transcription Ovary ovary

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Last update: Aug 31, 2015