Variant report

Variant rs34000130
Chromosome Location chr5:167531445-167531446
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:167513800-167536000 Weak transcription NHDF-Ad bronchial
2 chr5:167516200-167538400 Weak transcription HMEC breast
3 chr5:167516600-167532000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr5:167517400-167539400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr5:167519200-167534800 Weak transcription Esophagus oesophagus
6 chr5:167524800-167532800 Strong transcription Breast Myoepithelial Primary Cells Breast
7 chr5:167525800-167532000 Weak transcription Fetal Kidney kidney
8 chr5:167526600-167536800 Weak transcription Left Ventricle heart
9 chr5:167526800-167552800 Weak transcription Fetal Heart heart
10 chr5:167528600-167532000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr5:167529200-167533800 Strong transcription NHEK skin
12 chr5:167530400-167531600 Enhancers Sigmoid Colon Sigmoid Colon
13 chr5:167530400-167531800 Enhancers Colonic Mucosa Colon
14 chr5:167530600-167532600 Genic enhancers Right Ventricle heart
15 chr5:167530600-167533000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr5:167530800-167531600 Enhancers Duodenum Mucosa Duodenum
17 chr5:167530800-167532200 Enhancers Fetal Muscle Trunk muscle
18 chr5:167530800-167533400 Enhancers Fetal Muscle Leg muscle
19 chr5:167530800-167534000 Enhancers H1 Cell Line embryonic stem cell
20 chr5:167531200-167532800 Enhancers Cortex derived primary cultured neurospheres brain
21 chr5:167531200-167533200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
22 chr5:167531200-167533600 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr5:167531200-167533800 Enhancers HSMMtube muscle
24 chr5:167531200-167534200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
25 chr5:167531400-167531800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
26 chr5:167531400-167531800 Enhancers Fetal Intestine Small intestine
27 chr5:167531400-167531800 Flanking Active TSS Rectal Mucosa Donor 29 rectum
28 chr5:167531400-167531800 Active TSS Rectal Smooth Muscle rectum
29 chr5:167531400-167531800 Genic enhancers HSMM muscle
30 chr5:167531400-167532000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
31 chr5:167531400-167532000 Flanking Active TSS Rectal Mucosa Donor 31 rectum
32 chr5:167531400-167532400 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
33 chr5:167531400-167532400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
34 chr5:167531400-167532600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:167531400-167532800 Enhancers HUES6 Cell Line embryonic stem cell
36 chr5:167531400-167533200 Enhancers Fetal Lung lung
37 chr5:167531400-167533600 Enhancers Adipose Nuclei Adipose
38 chr5:167531400-167534000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr5:167531400-167534200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr5:167531400-167534200 Enhancers iPS-18 Cell Line embryonic stem cell

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