Variant report

Variant	rs34018005
Chromosome Location	chr18:28765623-28765624
allele	-/CAGAAACTCAGG
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3360998	chr18:28693111-28881812	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv131614	chr18:28765623-28765634	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2079678	chr18:28765623-28765635	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:28764400-28767000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr18:28764400-28771000	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr18:28764800-28766000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
4	chr18:28764800-28766600	Enhancers	HepG2	liver
5	chr18:28765200-28766000	Enhancers	Cortex derived primary cultured neurospheres	brain
6	chr18:28765200-28766000	Enhancers	HMEC	breast
7	chr18:28765200-28766400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr18:28765400-28765800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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