Variant report

No.	Distal block	Cell Line	Cell type
1	chr2:85944996..85948043-chr2:85949115..85952317,3	MCF-7	breast:
2	chr2:85936798..85938889-chr2:85946240..85947988,2	MCF-7	breast:
3	chr2:85941112..85944242-chr2:85945842..85948682,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs11126997	0.92[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11674181	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6759087	0.87[AMR][1000 genomes];0.97[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv874468	chr2:85926598-86001255	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:85940200-85947800	Enhancers	Primary neutrophils fromperipheralblood	blood
2	chr2:85941200-85967400	Weak transcription	Esophagus	oesophagus
3	chr2:85943800-85951800	Weak transcription	Lung	lung
4	chr2:85944000-85951600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
5	chr2:85944600-85947200	Enhancers	Stomach Mucosa	stomach
6	chr2:85945200-85951000	Weak transcription	Placenta	Placenta
7	chr2:85945600-85950800	Weak transcription	NHDF-Ad	bronchial
8	chr2:85946000-85947600	Enhancers	Skeletal Muscle Female	skeletal muscle
9	chr2:85946200-85947200	Enhancers	Ovary	ovary
10	chr2:85946400-85947600	Enhancers	Left Ventricle	heart
11	chr2:85946400-85947600	Enhancers	Psoas Muscle	Psoas
12	chr2:85946600-85947200	Enhancers	Adipose Nuclei	Adipose
13	chr2:85946600-85947200	Enhancers	Right Atrium	heart
14	chr2:85946600-85947600	Enhancers	Primary monocytes fromperipheralblood	blood
15	chr2:85946600-85947600	Enhancers	Colon Smooth Muscle	Colon
16	chr2:85946600-85947600	Enhancers	Fetal Heart	heart
17	chr2:85946600-85947600	Enhancers	Monocytes-CD14+_RO01746	blood
18	chr2:85946800-85947200	Enhancers	Fetal Muscle Leg	muscle
19	chr2:85946800-85947600	Enhancers	Right Ventricle	heart
20	chr2:85946800-85951200	Enhancers	Skeletal Muscle Male	skeletal muscle
21	chr2:85947000-85947200	Enhancers	Stomach Smooth Muscle	stomach

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